WormBase Tree Display for CDS: Bm3490
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| Bm3490 | Evidence | Curator_confirmed | WBPerson4055 | ||
|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Bm_v4_Chr3_scaffold_001 | ||
| Structure | Source_exons (12) | ||||
| DB_info | Database | TrEMBL | UniProtAcc | A0A0J9Y4U2 | |
| UniProt | UniProtAcc | A0A0J9Y4U2 | |||
| AlphaFold | entry | A0A0J9Y4U2 | |||
| Protein_id | Bm_v4_Chr3_scaffold_001 | CDQ02338 | 2 | ||
| DB_remark | BMA-UNC-38.1 protein; contains similarity to Pfam domains PF02931 (Neurotransmitter-gated ion-channel ligand binding domain), PF02932 (Neurotransmitter-gated ion-channel transmembrane region); contains similarity to Interpro domains IPR038050 (Neuronal acetylcholine receptor), IPR036719 (Neurotransmitter-gated ion-channel transmembrane domain superfamily), IPR002394 (Nicotinic acetylcholine receptor), IPR036734 (Neurotransmitter-gated ion-channel ligand-binding domain superfamily), IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding domain), IPR006029 (Neurotransmitter-gated ion-channel transmembrane domain) | ||||
| Origin | From_laboratory | HX | |||
| Species | Brugia malayi | ||||
| Properties | Coding | CDS | |||
| CDS_predicted_by | RATT | ||||
| Prediction_status | Confirmed | ||||
| Visible | Gene | WBGene00223751 | |||
| Corresponding_transcript | Bm3490.1 | ||||
| Corresponding_protein | BM46287 | ||||
| Matching_cDNA | brugia_GG1973|c8_g1_i1 | Inferred_automatically | transcript_builder.pl | ||
| RNASeq_FPKM (10) | |||||
| Last_reviewed | 06 Jul 2018 09:41:22 | WBPerson4055 | |||
| Remark | [180706 mh6] This CDS has been updated based on the RNAseq data. | Person_evidence | WBPerson6972 | ||
| Curator_confirmed | WBPerson4055 | ||||
| From_analysis | RNASeq | ||||
| Method | curated |
