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WormBase Tree Display for CDS: Bm13874a

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Name Class

Bm13874aEvidenceCurator_confirmedWBPerson4055
SMapS_parentSequenceBm_v4_Chr4_scaffold_001
StructureSource_exons143
137232
344461
647753
9591227
13151447
15601672
23982568
DB_infoDatabaseTrEMBLUniProtAccA0A0J9XVM9
UniProtUniProtAccA0A0J9XVM9
AlphaFoldentryA0A0J9XVM9
Protein_idBm_v4_Chr4_scaffold_001CDP962962
DB_remarkBMA-FIB-1 protein; contains similarity to Pfam domain PF01269 (Fibrillarin); contains similarity to Interpro domains IPR029063 (S-adenosyl-L-methionine-dependent methyltransferase superfamily), IPR000692 (rRNA 2'-O-methyltransferase fibrillarin-like)
OriginFrom_laboratoryHX
SpeciesBrugia malayi
PropertiesCodingCDS
CDS_predicted_byRATT
Prediction_statusConfirmed
IsoformInferred_automaticallyxace
VisibleGeneWBGene00234135
Corresponding_transcriptBm13874a.1
Bm13874a.2
Corresponding_proteinBM07110
Matching_cDNAIsoSeq_brugia_PB_4644_6Inferred_automaticallytranscript_builder.pl
BE352796Inferred_automaticallytranscript_builder.pl
AA471503Inferred_automaticallytranscript_builder.pl
brugia_GG6427|c5_g1_i4Inferred_automaticallytranscript_builder.pl
AA570923Inferred_automaticallytranscript_builder.pl
brugia_GG6427|c5_g1_i3Inferred_automaticallytranscript_builder.pl
brugia_GG6427|c5_g1_i2Inferred_automaticallytranscript_builder.pl
brugia_GG6427|c5_g1_i1Inferred_automaticallytranscript_builder.pl
IsoSeq_brugia_PB_4644_1Inferred_automaticallytranscript_builder.pl
AW245011Inferred_automaticallytranscript_builder.pl
Brief_identificationFibrillarin, putativeAccession_evidenceTIGRBm1_55190
RNASeq_FPKMWBls:0000078152.838From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
187.825From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
19.7476From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
20.4833From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
227.733From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
5.38725From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
7.77326From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
WBls:0000080673.878From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
674.932From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
682.101From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
756.328From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
WBls:0000081 (23)
WBls:0000082157.806From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
163.922From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
170.436From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
200.387From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
200.881From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
WBls:0000083 (80)
WBls:0000092337.682From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
345.418From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
WBls:0000094267.746From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
279.414From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:00000971054.81From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
1215.99From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
1358.23From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
1437.86From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
163.799From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
700.869From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
WBls:00006621018.15From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
1205.22From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:0000663596.94From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Remark[131015 mh6] extended the GenBlastG based on the RNASeqCurator_confirmedWBPerson4055
Methodcurated