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WormBase Tree Display for CDS: Bm13822

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Name Class

Bm13822EvidenceCurator_confirmedWBPerson615
SMapS_parentSequenceBm_v4_Chr4_scaffold_001
StructureSource_exons (11)
DB_infoDatabaseTrEMBLUniProtAccA0A0K0IZ52
UniProtUniProtAccA0A0K0IZ52
AlphaFoldentryA0A0K0IZ52
UniProt_GCRPUniProtAccA0A0K0IZ52
Protein_idBm_v4_Chr4_scaffold_001CRZ261031
DB_remarkcontains similarity to Pfam domain PF03109 (ABC1 atypical kinase-like domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR004147 (ABC1 atypical kinase-like domain)
OriginFrom_laboratoryHX
SpeciesBrugia malayi
PropertiesCodingCDS
CDS_predicted_byRATT
Prediction_statusConfirmed
VisibleGeneWBGene00234083
Corresponding_transcriptBm13822.1
Corresponding_proteinBM28970
Matching_cDNAbrugia_GG1738|c26_g1_i1Inferred_automaticallytranscript_builder.pl
brugia_GG1738|c26_g1_i3Inferred_automaticallytranscript_builder.pl
brugia_GG1738|c26_g2_i1Inferred_automaticallytranscript_builder.pl
brugia_GG1738|c26_g1_i2Inferred_automaticallytranscript_builder.pl
AW191496Inferred_automaticallytranscript_builder.pl
Brief_identificationABC1 family proteinAccession_evidenceTIGRBm1_24145
RNASeq_FPKMWBls:000007851.7685From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
53.0861From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
55.9606From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
58.2537From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
61.9988From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
68.287From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
69.1381From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
WBls:0000080100.594From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
102.284From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
126.336From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
127.627From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
WBls:0000081 (23)
WBls:000008245.8088From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
49.0245From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
53.4975From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
88.9217From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
97.4025From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
WBls:0000083 (80)
WBls:000009279.1976From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
81.1853From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
WBls:000009442.1102From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
45.5236From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
WBls:0000097116.811From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
139.217From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
54.6315From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
82.4093From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
90.4507From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
97.4283From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
WBls:000066292.1186From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
93.9044From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
WBls:000066331.8214From_analysisRNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
Remark[20121001 js] this gene is based on RNASeq data and BLASTX alignmentsProtein_id_evidenceWP:CE09076
[131112 pad] Renamed from Bm13822c as this is a single Isoform locus.Curator_confirmedWBPerson1983
Methodcurated