WormBase Tree Display for CDS: Bm12493

Bm12493 Evidence: Inferred_automatically: make_isoforms.pl
  SMap: S_parent: Sequence: Bm_v4_Chr4_scaffold_001
  Structure: Source_exons: 1 109
      487 701
      947 1075
      1322 1591
      1722 1940
  DB_info: Database: TrEMBL UniProtAcc A0A1I9GAX9
      UniProt UniProtAcc A0A1I9GAX9
      AlphaFold entry A0A1I9GAX9
    Protein_id: Bm_v4_Chr4_scaffold_001 CDQ08155 1
    DB_remark: contains similarity to Pfam domains PF00149 (Calcineurin-like phosphoesterase), PF16891 (Serine-threonine protein phosphatase N-terminal domain); contains similarity to Interpro domains IPR029052 (Metallo-dependent phosphatase-like), IPR004843 (Calcineurin-like phosphoesterase domain, ApaH type), IPR031675 (Serine-threonine protein phosphatase, N-terminal), IPR006186 (Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase)
  Origin: From_laboratory: HX
    Species: Brugia malayi
  Properties: Coding: CDS
      CDS_predicted_by: exonerate
      Prediction_status: Confirmed
  Visible: Gene: WBGene00232754
    Corresponding_transcript: Bm12493.1
      Bm12493.2
    Corresponding_protein: BM35953
    Matching_cDNA: brugia_GG6981|c0_g1_i1 Inferred_automatically: transcript_builder.pl
      IsoSeq_brugia_PB_4685_1 Inferred_automatically: transcript_builder.pl
      brugia_GG6339|c12_g1_i2 Inferred_automatically: transcript_builder.pl
      brugia_GG6339|c12_g1_i1 Inferred_automatically: transcript_builder.pl
      brugia_GG6339|c8_g1_i1 Inferred_automatically: transcript_builder.pl
      brugia_GG6981|c0_g2_i1 Inferred_automatically: transcript_builder.pl
      IsoSeq_brugia_PB_4685_4 Inferred_automatically: transcript_builder.pl
    RNASeq_FPKM: WBls:0000078 1.73597 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415910
        2.02648 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415908
        2.61051 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415909
        2.63437 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX2415911
        3.8425 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539875
        3.95763 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539874
        4.6486 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000078.Unknown.WBbt:0007833.SRP068692.SRX1539873
      WBls:0000080 13.4634 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539949
        21.814 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505770
        25.7395 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX2505771
        8.47894 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000080.Unknown.WBbt:0007833.SRP068692.SRX1539947
      WBls:0000081 (23)
      WBls:0000082 2.9357 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Female.WBbt:0007833.SRP068692.SRX1539869
        3.07788 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026041
        3.12322 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026033
        3.21938 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.Unknown.WBbt:0007833.ERP000948.ERX026039
        3.55489 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000082.female.WBbt:0007833.SRP068692.SRX1539871
      WBls:0000083 (80)
      WBls:0000092 5.35501 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539746
        6.51269 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000092.Unknown.WBbt:0007833.SRP068692.SRX1539751
      WBls:0000094 19.6158 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026035
        21.8635 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000094.Male.WBbt:0007833.ERP000948.ERX026034
      WBls:0000097 0 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539876
            RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539886
            RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505170
        10.314 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505171
        4.41298 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX1539817
        7.43644 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000097.Unknown.WBbt:0007833.SRP068692.SRX2505769
      WBls:0000662 10.1566 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026040
        7.30633 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000662.Unknown.WBbt:0007833.ERP000948.ERX026031
      WBls:0000663 14.947 From_analysis: RNASeq.brugia.WBStrain00041073.WBls:0000663.Unknown.WBbt:0007833.ERP000948.ERX026038
  Method: curated