WormBase Tree Display for CDS: B0491.2
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B0491.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | B0491 | |||
Structure | Source_exons | 1 | 141 | |||
189 | 1022 | |||||
DB_info | Database | SwissProt | UniProtAcc | P12114 | ||
UniProt | UniProtAcc | P12114 | ||||
UniProt_GCRP | UniProtAcc | P12114 | ||||
AlphaFold | entry | P12114 | ||||
NCBI_protein | GI_number | GI:3873801 | ||||
TREEFAM | TREEFAM_ID | TF321978 | ||||
Protein_id | CHROMOSOME_II | CAA90084 | 1 | |||
DB_remark | SQT-1 protein; contains similarity to Pfam domain PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domain IPR002486 (Nematode cuticle collagen, N-terminal) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00005016 | ||||
Corresponding_transcript | B0491.2.1 | |||||
B0491.2.2 | ||||||
Corresponding_protein | CE02104 | |||||
Corresponding_PCR_product | WBPaper00038381:B0491_1_1 | |||||
cenix:201-g3 | ||||||
mv_AAA65468 | ||||||
sjj_B0491.2 | ||||||
Corresponding_oligo_set (16) | ||||||
Matching_cDNA (223) | ||||||
RNAi_result (19) | ||||||
Microarray_results (20) | ||||||
Brief_identification | Cuticle collagen sqt-1 | Accession_evidence | UniProt | SP:P12114 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |