WormBase Tree Display for CDS: B0361.10
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B0361.10 | Evidence | Inferred_automatically | make_isoforms.pl | ||
---|---|---|---|---|---|
SMap | S_parent | Sequence | B0361 | ||
Structure | Source_exons | 1 | 186 | ||
232 | 381 | ||||
811 | 1080 | ||||
DB_info | Database | TrEMBL | UniProtAcc | Q9TXZ9 | |
UniProt | UniProtAcc | Q9TXZ9 | |||
UniProt_GCRP | UniProtAcc | Q9TXZ9 | |||
AlphaFold | entry | Q9TXZ9 | |||
NCBI_protein | GI_number | GI:373253804 | |||
TREEFAM | TREEFAM_ID | TF105606 | |||
Protein_id | CHROMOSOME_III | CCD61825 | 1 | ||
DB_remark | YKT-6 protein; contains similarity to Pfam domains PF00957 (Synaptobrevin), PF13774 (Regulated-SNARE-like domain); contains similarity to Interpro domains IPR010908 (Longin domain), IPR001388 (Synaptobrevin-like), IPR042855 (v-SNARE, coiled-coil homology domain), IPR011012 (Longin-like domain superfamily) | ||||
Origin | From_laboratory | RW | |||
Species | Caenorhabditis elegans | ||||
Properties | Coding | CDS | |||
Prediction_status | Confirmed | ||||
Visible | Gene | WBGene00015164 | |||
Corresponding_transcript | B0361.10.1 | ||||
B0361.10.2 | |||||
Corresponding_protein | CE20451 | ||||
Corresponding_PCR_product | TH:329a8 | ||||
TH:340c5 | |||||
cenix:329-a8 | |||||
cenix:340-c5 | |||||
mv_B0361.8.v5 | |||||
mv_G_yc701E7 | |||||
sjj_B0361.10 | |||||
sjj_B0361.8 | |||||
Corresponding_oligo_set (16) | |||||
Matching_cDNA (39) | |||||
RNAi_result (70) | |||||
Microarray_results (19) | |||||
RNASeq_FPKM (74) | |||||
Remark | [981015 js] this used to be the last 3 exons of B0361.8 but was made a separate gene based on Blast similarity communicated by Mike Nonet- | Curator_confirmed | WBPerson615 | ||
Associated_feature | WBsf008573 | ||||
WBsf020418 | |||||
Method | curated |