WormBase Tree Display for CDS: B0303.15
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| B0303.15 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | B0303 | |||
| Structure | Source_exons | 1 | 83 | |||
| 271 | 509 | |||||
| 559 | 824 | |||||
| DB_info | Database | SwissProt | UniProtAcc | P34264 | ||
| UniProt | UniProtAcc | P34264 | ||||
| UniProt_GCRP | UniProtAcc | P34264 | ||||
| AlphaFold | entry | P34264 | ||||
| NCBI_protein | GI_number | GI:351065732 | ||||
| TREEFAM | TREEFAM_ID | TF313471 | ||||
| Protein_id | CHROMOSOME_III | CCD61715 | 1 | |||
| DB_remark | MRPL-11 protein; contains similarity to Pfam domains PF00298 (Ribosomal protein L11, RNA binding domain), PF03946 (Ribosomal protein L11, N-terminal domain); contains similarity to Interpro domains IPR036796 (Large ribosomal subunit protein uL11, N-terminal domain superfamily), IPR020783 (Large ribosomal subunit protein uL11, C-terminal), IPR036769 (Large ribosomal subunit protein uL11, C-terminal domain superfamily), IPR020784 (Large ribosomal subunit protein uL11, N-terminal), IPR000911 (Ribosomal protein uL11) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00015133 | ||||
| Corresponding_transcript | B0303.15.1 | |||||
| Corresponding_protein | CE00004 | |||||
| Corresponding_PCR_product | TH:306C8 | |||||
| cenix:306-c8 | ||||||
| mv_B0303.15 | ||||||
| sjj_B0303.15 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA (32) | ||||||
| RNAi_result | WBRNAi00008292 | |||||
| WBRNAi00038900 | ||||||
| WBRNAi00002511 | ||||||
| WBRNAi00007915 | ||||||
| WBRNAi00028073 | ||||||
| WBRNAi00071334 | ||||||
| WBRNAi00090935 | ||||||
| WBRNAi00024378 | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | Large ribosomal subunit protein uL11m | Accession_evidence | UniProt | SP:P34264 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf016751 | |||||
| Method | curated |
