WormBase Tree Display for CDS: B0024.1
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B0024.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | B0024 | |||
Structure | Source_exons | 1 | 117 | |||
243 | 1019 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q17417 | ||
UniProt | UniProtAcc | Q17417 | ||||
UniProt_GCRP | UniProtAcc | Q17417 | ||||
AlphaFold | entry | Q17417 | ||||
NCBI_protein | GI_number | GI:3873667 | ||||
TREEFAM | TREEFAM_ID | TF316783 | ||||
Protein_id | CHROMOSOME_V | CAA94874 | 1 | |||
DB_remark | COL-149 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00000722 | ||||
Corresponding_transcript | B0024.1.1 | |||||
Corresponding_protein | CE05146 | |||||
Corresponding_PCR_product | cenix:192-d1 | |||||
mv_B0024.1 | ||||||
sjj_B0024.1 | ||||||
Corresponding_oligo_set (16) | ||||||
Matching_cDNA (139) | ||||||
RNAi_result | WBRNAi00027941 | |||||
WBRNAi00009544 | ||||||
WBRNAi00038643 | ||||||
Microarray_results (17) | ||||||
Brief_identification | Nematode cuticle collagen N-terminal domain-containing protein | Accession_evidence | UniProt | TR:Q17417 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |