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WormBase Tree Display for CDS: B0024.1

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Name Class

B0024.1EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceB0024
StructureSource_exons1117
2431019
DB_infoDatabaseTrEMBLUniProtAccQ17417
UniProtUniProtAccQ17417
UniProt_GCRPUniProtAccQ17417
AlphaFoldentryQ17417
NCBI_proteinGI_numberGI:3873667
TREEFAMTREEFAM_IDTF316783
Protein_idCHROMOSOME_VCAA948741
DB_remarkCOL-149 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00000722
Corresponding_transcriptB0024.1.1
Corresponding_proteinCE05146
Corresponding_PCR_productcenix:192-d1
mv_B0024.1
sjj_B0024.1
Corresponding_oligo_set (16)
Matching_cDNA (139)
RNAi_resultWBRNAi00027941
WBRNAi00009544
WBRNAi00038643
Microarray_results (17)
Brief_identificationNematode cuticle collagen N-terminal domain-containing proteinAccession_evidenceUniProtTR:Q17417
RNASeq_FPKM (74)
Methodcurated