WormBase Tree Display for CDS: ZK1098.10p
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| ZK1098.10p | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | ZK1098 | |||
| Structure | Source_exons (11) | |||||
| DB_info | Database | SwissProt | UniProtAcc | P34609 | ||
| UniProtIsoformAcc | P34609-18 | |||||
| UniProt | UniProtAcc | P34609 | ||||
| UniProt_GCRP | UniProtAcc | P34609 | ||||
| AlphaFold | entry | P34609 | ||||
| NCBI_protein | GI_number | GI:526478844 | ||||
| Protein_id | CHROMOSOME_III | CDG24117 | 1 | |||
| DB_remark | UNC-16 protein; contains similarity to Pfam domain PF19056 (WD40 repeated domain); contains similarity to Interpro domains IPR011047 (Quinoprotein alcohol dehydrogenase-like superfamily), IPR039911 (JNK-interacting protein 3/4), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Feature_evidence | WBsf161663 | ||||
| From_analysis | RNASeq_Hillier_elegans | |||||
| Visible | Gene | WBGene00006755 | ||||
| Corresponding_transcript | ZK1098.10p.1 | |||||
| Corresponding_protein | CE48473 | |||||
| Corresponding_PCR_product | TH:321D11 | |||||
| cenix:321-d11 | ||||||
| mv_ZK1098.10 | ||||||
| sjj_ZK1098.10 | ||||||
| Corresponding_oligo_set (14) | ||||||
| Matching_cDNA (32) | ||||||
| RNAi_result (15) | ||||||
| Microarray_results (21) | ||||||
| Brief_identification | JNK-interacting protein | Accession_evidence | UniProt | SP:P34609 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 16 Aug 2013 00:00:00 | WBPerson1983 | ||||
| Remark | [130626 pad] Created this alternate Isoform of ZK1098.10c that contains an additional exon as identified by RNASeq splicing data. | Curator_confirmed | WBPerson1983 | |||
| From_analysis | RNASeq_Hillier_elegans | |||||
| Method | curated |
