WormBase Tree Display for CDS: Y74C10AR.1a
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Y74C10AR.1a | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y74C10AR | |||
Structure | Source_exons | 1 | 136 | |||
940 | 1373 | |||||
2344 | 2698 | |||||
3573 | 3631 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q965S8 | ||
UniProt | UniProtAcc | Q965S8 | ||||
UniProt_GCRP | UniProtAcc | Q965S8 | ||||
AlphaFold | entry | Q965S8 | ||||
NCBI_protein | GI_number | GI:373254561 | ||||
Protein_id | CHROMOSOME_I | CCD73538 | 1 | |||
DB_remark | EIF-3.I protein; contains similarity to Pfam domain PF00400 (WD domain, G-beta repeat); contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR036322 (WD40-repeat-containing domain superfamily), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Curator_confirmed | WBPerson1983 | ||||
Visible | Gene | WBGene00001232 | ||||
Corresponding_transcript | Y74C10AR.1a.1 | |||||
Corresponding_protein | CE30325 | |||||
Corresponding_PCR_product | cenix:171-g9 | |||||
mv_Y74C10AR.b | ||||||
mv_Y74C10A_153.a | ||||||
sjj_Y39G10A_237.b | ||||||
sjj_Y74C10A_152.b | ||||||
smd_Y39G10A_237.b | ||||||
smd_Y74C10A_152.b | ||||||
Corresponding_oligo_set (19) | ||||||
Matching_cDNA (35) | ||||||
RNAi_result | WBRNAi00096910 | |||||
WBRNAi00058408 | ||||||
WBRNAi00085626 | ||||||
WBRNAi00110765 | ||||||
WBRNAi00091064 | ||||||
WBRNAi00096970 | ||||||
WBRNAi00037829 | ||||||
WBRNAi00000865 | ||||||
WBRNAi00004593 | ||||||
Microarray_results (21) | ||||||
Brief_identification | Eukaryotic translation initiation factor 3 subunit I | Accession_evidence | UniProt | SP:Q965S8 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 22 Apr 2014 00:00:00 | WBPerson1983 | ||||
Remark | [020121 js] added the last intron based on EST data, but note that ESTs do not confirm the last exon - | Curator_confirmed | WBPerson615 | |||
Method | curated |