WormBase Tree Display for CDS: Y113G7B.5a
expand all nodes | collapse all nodes | view schema
Y113G7B.5a | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y113G7B | |||
Structure | Source_exons | 1 | 41 | |||
173 | 250 | |||||
298 | 937 | |||||
988 | 1144 | |||||
1190 | 1212 | |||||
DB_info | Database | TrEMBL | UniProtAcc | G5EEX5 | ||
UniProt | UniProtAcc | G5EEX5 | ||||
AlphaFold | entry | G5EEX5 | ||||
NCBI_protein | GI_number | GI:5824693 | ||||
Protein_id | CHROMOSOME_V | CAB54327 | 1 | |||
DB_remark | FOG-2 protein; contains similarity to Pfam domains PF00646 (F-box domain), PF01827 (FTH domain); contains similarity to Interpro domains IPR002900 (Domain of unknown function DUF38/FTH, Caenorhabditis species), IPR036047 (F-box-like domain superfamily), IPR001810 (F-box domain), IPR040161 (F-box A protein FB224) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Partially_confirmed | |||||
Isoform | Accession_evidence | NDB | C32734 | |||
Visible | Gene | WBGene00001482 | ||||
Corresponding_transcript | Y113G7B.5a.1 | |||||
Corresponding_protein | CE23287 | |||||
Corresponding_PCR_product | cenix:245-e3 | |||||
mv_Y113G7B.5 | ||||||
sjj_Y113G7B.5 | ||||||
Corresponding_oligo_set (14) | ||||||
Matching_cDNA (13) | ||||||
RNAi_result | WBRNAi00001660 | |||||
WBRNAi00062416 | ||||||
WBRNAi00036593 | ||||||
WBRNAi00092185 | ||||||
WBRNAi00055407 | ||||||
Microarray_results (17) | ||||||
Brief_identification | F-box domain-containing protein | Accession_evidence | UniProt | TR:G5EEX5 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 20 Oct 2005 00:00:00 | WBPerson1983 | ||||
Method | curated |