WormBase Tree Display for CDS: T26C5.3d
expand all nodes | collapse all nodes | view schema
T26C5.3d | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | T26C5 | |||
Structure | Source_exons | 1 | 84 | |||
4676 | 4878 | |||||
4926 | 5183 | |||||
6001 | 6161 | |||||
8254 | 8792 | |||||
8845 | 9035 | |||||
9094 | 9219 | |||||
9381 | 9468 | |||||
DB_info | Database | TrEMBL | UniProtAcc | A5Z2S7 | ||
UniProt | UniProtAcc | A5Z2S7 | ||||
AlphaFold | entry | A5Z2S7 | ||||
NCBI_protein | GI_number | GI:148879276 | ||||
Protein_id | CHROMOSOME_II | CAN99723 | 1 | |||
DB_remark | contains similarity to Pfam domain PF13000 (Acetyl-coenzyme A transporter 1); contains similarity to Interpro domains IPR036259 (MFS transporter superfamily), IPR004752 (AmpG-like permease/Acetyl-coenzyme A transporter 1), IPR024371 (Acetyl-coenzyme A transporter 1-like) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Isoform | Accession_evidence | NDB | EC015091 | |||
Visible | Gene | WBGene00012033 | ||||
Corresponding_transcript | T26C5.3d.1 | |||||
Corresponding_protein | CE41162 | |||||
Corresponding_PCR_product | cenix:202-c6 | |||||
cenix:202-d6 | ||||||
mv_T26C5.3a | ||||||
mv_T26C5.3b | ||||||
sjj2_T26C5.3a | ||||||
sjj_T26C5.3 | ||||||
Corresponding_oligo_set (16) | ||||||
Matching_cDNA (36) | ||||||
RNAi_result | WBRNAi00054194 | |||||
WBRNAi00000800 | ||||||
WBRNAi00054193 | ||||||
WBRNAi00035992 | ||||||
Microarray_results (23) | ||||||
Brief_identification | Acetyl-coenzyme A transporter 1 | Accession_evidence | UniProt | TR:A5Z2S7 | ||
RNASeq_FPKM (74) | ||||||
Last_reviewed | 08 May 2007 00:00:00 | WBPerson1983 | ||||
Remark | [070508 pad] Gene prediction entered to represent an alternate 5' exon for this gene. | Accession_evidence | NDB | EC015091 | ||
Curator_confirmed | WBPerson1983 | |||||
Method | curated |