WormBase Tree Display for CDS: T05A10.6
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| T05A10.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T05A10 | |||
| Structure | Source_exons | 1 | 47 | |||
| 480 | 541 | |||||
| 711 | 787 | |||||
| 830 | 1021 | |||||
| 1066 | 1133 | |||||
| 1662 | 1692 | |||||
| DB_info | Database (6) | |||||
| Protein_id | CHROMOSOME_X | CAA92138 | 2 | |||
| DB_remark | contains similarity to Interpro domain IPR035940 (CAP superfamily) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00011463 | ||||
| Corresponding_transcript | T05A10.6.1 | |||||
| Corresponding_protein | CE40870 | |||||
| Corresponding_PCR_product | cenix:34-f5 | |||||
| mv_T05A10.6 | ||||||
| sjj_T05A10.6 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA | male_Nanopore_Roach_146921 | Inferred_automatically | transcript_builder.pl | |||
| male_Nanopore_Roach_158609 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_105752 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_104975 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_150072 | Inferred_automatically | transcript_builder.pl | ||||
| EC007775 | Inferred_automatically | transcript_builder.pl | ||||
| OSTR202F10_1 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_181269 | Inferred_automatically | transcript_builder.pl | ||||
| EC005804 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG664|c2_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00045987 | |||||
| WBRNAi00035164 | ||||||
| WBRNAi00018174 | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | DUF19 domain-containing protein | Accession_evidence | UniProt | TR:P90960 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 27 Mar 2007 00:00:00 | WBPerson1983 | ||||
| Remark | 961127:This gene was originally predicted as part of T05A10.4 | |||||
| [070327 pad] Gene prediction extended at the 5' and 3' ends based on EST data, the original prediction only represented the core of the gene. | Accession_evidence | NDB | EC005804 | |||
| Curator_confirmed | WBPerson1983 | |||||
| Method | curated |
