WormBase Tree Display for CDS: PPA24683
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PPA24683 | SMap | S_parent | Sequence | PPA_ChrIII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (29) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2864-1.21 | ||
DB_remark | PPA-UNC-51 protein; contains similarity to Pfam domains PF00069 (Protein kinase domain), PF12063 (Atg1-like, MIT domain 1); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR022708 (Serine/threonine-protein kinase Atg1-like, tMIT domain), IPR000719 (Protein kinase domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00114237 | ||||
Corresponding_transcript | PPA24683.1 | |||||
Corresponding_protein | PP73938 | |||||
Corresponding_oligo_set | GPL14372_Probes_27873 | |||||
GPL14372_Probes_27874 | ||||||
GPL14372_Probes_27875 | ||||||
GPL14372_Probes_27876 | ||||||
GPL14372_Probes_27877 | ||||||
Microarray_results | GPL14372_Probes_27873 | |||||
GPL14372_Probes_27874 | ||||||
GPL14372_Probes_27875 | ||||||
GPL14372_Probes_27876 | ||||||
GPL14372_Probes_27877 | ||||||
RNASeq_FPKM | WBls:0000032 | 1.18634 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2864-1.21 | Curator_confirmed | WBPerson4055 | |||
Method | curated |