WormBase Tree Display for CDS: F39G3.5b
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| F39G3.5b | SMap | S_parent | Sequence | F39G3 | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 381 | |||
| 429 | 494 | |||||
| 1297 | 1308 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | H2KYX0 | ||
| UniProt | UniProtAcc | H2KYX0 | ||||
| AlphaFold | entry | H2KYX0 | ||||
| NCBI_protein | GI_number | GI:351050650 | ||||
| Protein_id | CHROMOSOME_V | CCD65245 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF03188 (Eukaryotic cytochrome b561); contains similarity to Interpro domains IPR043205 (Cytochrome b561/Cytochrome b reductase 1-like), IPR006593 (Cytochrome b561/ferric reductase transmembrane) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | EMBL | BJ789755 | |||
| Visible | Gene | WBGene00018210 | ||||
| Corresponding_transcript | F39G3.5b.1 | |||||
| F39G3.5b.2 | ||||||
| Corresponding_protein | CE36933 | |||||
| Corresponding_PCR_product | cenix:132-g12 | |||||
| mv_G_YK8545_1 | ||||||
| sjj2_F39G3.5a | ||||||
| sjj_F39G3.5 | ||||||
| Corresponding_oligo_set | 180165_at | |||||
| Aff_F39G3.5 | ||||||
| GPL8673_F39G3_5bP00001 | ||||||
| Matching_cDNA | male_Nanopore_Roach_36464 | Inferred_automatically | transcript_builder.pl | |||
| L2_Nanopore_Roach_32369 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_30985 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_242791 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG5107|c0_g1_i2 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_235458 | Inferred_automatically | transcript_builder.pl | ||||
| yk1625g03.3 | Inferred_automatically | transcript_builder.pl | ||||
| yk1625g03.5 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_337134 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00033598 | |||||
| Microarray_results | SMD_F39G3.5 | |||||
| 180165_at | ||||||
| Aff_F39G3.5 | ||||||
| GPL8673_F39G3_5bP00001 | ||||||
| Brief_identification | Cytochrome b561 domain-containing protein | Accession_evidence | UniProt | TR:H2KYX0 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 01 Jul 2004 00:00:00 | WBPerson1849 | ||||
| Remark | [20040701 tb] created based on yk1625g03.3. | Curator_confirmed | WBPerson1849 | |||
| Associated_feature | WBsf008798 | |||||
| Method | curated |
