WormBase Tree Display for CDS: F15D3.1j
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| F15D3.1j | Evidence | Curator_confirmed | WBPerson1983 | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | CHROMOSOME_I | |||
| Structure | Source_exons (31) | |||||
| DB_info | Database | TrEMBL | UniProtAcc | V6CJE3 | ||
| UniProt | UniProtAcc | V6CJE3 | ||||
| AlphaFold | entry | V6CJE3 | ||||
| NCBI_protein | GI_number | GI:563406076 | ||||
| Protein_id | CHROMOSOME_I | CDK13555 | 1 | |||
| DB_remark | DYS-1 protein; contains similarity to Pfam domains PF00435 (Spectrin repeat), PF00569 (Zinc finger, ZZ type), PF09068 (EF hand), PF09069 (EF-hand); contains similarity to Interpro domains IPR015154 (EF-hand domain, type 2), IPR043145 (Zinc finger, ZZ-type superfamily), IPR018159 (Spectrin/alpha-actinin), IPR001202 (WW domain), IPR002017 (Spectrin repeat), IPR036020 (WW domain superfamily), IPR011992 (EF-hand domain pair), IPR015153 (EF-hand domain, type 1), IPR000433 (Zinc finger, ZZ-type) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Curator_confirmed | WBPerson1983 | ||||
| From_analysis | RNASeq_Hillier_elegans | |||||
| Visible | Gene | WBGene00001131 | ||||
| Corresponding_transcript | F15D3.1j.1 | |||||
| Corresponding_protein | CE49315 | |||||
| Corresponding_PCR_product | cenix:147-g3 | |||||
| cenix:53-a8 | ||||||
| mv_F15D3.1b | ||||||
| sjj_F15D3.1 | ||||||
| sjj_F15D3.9 | ||||||
| sjj_F32B4.3 | ||||||
| smd_F15D3.9 | ||||||
| Corresponding_oligo_set (25) | ||||||
| Matching_cDNA (20) | ||||||
| RNAi_result (13) | ||||||
| Microarray_results (30) | ||||||
| Brief_identification | Dystrophin-1 | Accession_evidence | UniProt | SP:Q9TW65 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 28 Nov 2013 00:00:00 | WBPerson1983 | ||||
| Remark | [131010 pad] Cloned from template model F15D3.1d, This Novel Isoform utilises the same exon structure as the template Isoform but undergoes a single inframe exon skipping event. | Curator_confirmed | WBPerson1983 | |||
| From_analysis | RNASeq_Hillier_elegans | |||||
| Method | curated |
