WormBase Tree Display for CDS: F15A8.6b
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| F15A8.6b | Evidence | Curator_confirmed | WBPerson1983 | |||
|---|---|---|---|---|---|---|
| Inferred_automatically | make_isoforms.pl | |||||
| SMap | S_parent | Sequence | F15A8 | |||
| Structure | Source_exons | 1 | 60 | |||
| 2891 | 2959 | |||||
| 3367 | 3663 | |||||
| 3709 | 3791 | |||||
| 3965 | 4209 | |||||
| 4372 | 4503 | |||||
| 4581 | 4996 | |||||
| 5407 | 5551 | |||||
| 5598 | 5727 | |||||
| 6066 | 6246 | |||||
| DB_info | Database | KEGG | KEGG_id | 3.1.1.- | ||
| TrEMBL | UniProtAcc | A0A1C3NSL8 | ||||
| UniProt | UniProtAcc | A0A1C3NSL8 | ||||
| UniProt_GCRP | UniProtAcc | A0A1C3NSL8 | ||||
| AlphaFold | entry | A0A1C3NSL8 | ||||
| NCBI_protein | GI_number | GI:1047833059 | ||||
| Protein_id | CHROMOSOME_X | SBV53395 | 1 | |||
| DB_remark | CEST-26 protein; contains similarity to Pfam domain PF00135 (Carboxylesterase family); contains similarity to Interpro domains IPR029058 (Alpha/Beta hydrolase fold), IPR002018 (Carboxylesterase, type B) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Curator_confirmed | WBPerson1983 | ||||
| Visible | Gene | WBGene00017478 | ||||
| Corresponding_transcript | F15A8.6b.1 | |||||
| Corresponding_protein | CE51719 | |||||
| Corresponding_PCR_product | cenix:60-c1 | |||||
| mv_F15A8.6 | ||||||
| sjj_F15A8.6 | ||||||
| Corresponding_oligo_set (15) | ||||||
| Matching_cDNA | male_Nanopore_Roach_105725 | |||||
| male_Nanopore_Roach_107259 | ||||||
| male_Nanopore_Roach_124210 | ||||||
| young_adult_Nanopore_Roach_84156 | ||||||
| L1_Nanopore_Roach_96574 | ||||||
| L1_Nanopore_Roach_67356 | ||||||
| L2_Nanopore_Roach_66579 | ||||||
| adult_Nanopore_Roach_4337 | ||||||
| L1_Nanopore_Roach_66037 | ||||||
| male_Nanopore_Roach_11198 | ||||||
| RNAi_result | WBRNAi00023200 | |||||
| WBRNAi00030989 | ||||||
| WBRNAi00023712 | ||||||
| WBRNAi00044690 | ||||||
| WBRNAi00013353 | ||||||
| WBRNAi00024000 | ||||||
| WBRNAi00023423 | ||||||
| Microarray_results (17) | ||||||
| Brief_identification | Carboxylic ester hydrolase | Accession_evidence | UniProt | TR:A0A1C3NSL8 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 30 Sep 2016 17:09:35 | WBPerson1983 | ||||
| Remark | [160613 pad] Created this isoform based on the RNASeq splice data. | Curator_confirmed | WBPerson1983 | |||
| From_analysis | RNASeq | |||||
| Method | curated |
