WormBase Tree Display for CDS: D1044.7
expand all nodes | collapse all nodes | view schema
| D1044.7 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | D1044 | |||
| Structure | Source_exons | 1 | 43 | |||
| 84 | 148 | |||||
| 201 | 315 | |||||
| 462 | 587 | |||||
| 641 | 959 | |||||
| 1101 | 1341 | |||||
| 1388 | 1681 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q95QP8 | ||
| UniProt | UniProtAcc | Q95QP8 | ||||
| UniProt_GCRP | UniProtAcc | Q95QP8 | ||||
| AlphaFold | entry | Q95QP8 | ||||
| NCBI_protein | GI_number | GI:351060656 | ||||
| TREEFAM | TREEFAM_ID | TF351707 | ||||
| Protein_id | CHROMOSOME_III | CCD68374 | 1 | |||
| DB_remark | contains similarity to Pfam domains PF01683 (EB module), PF14625 (Lustrin, cysteine-rich repeated domain); contains similarity to Interpro domains IPR028150 (Lustrin, cysteine-rich repeated), IPR006149 (EB domain), IPR006150 (Cysteine-rich repeat) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00017032 | ||||
| Corresponding_transcript | D1044.7.1 | |||||
| Corresponding_protein | CE27895 | |||||
| Corresponding_PCR_product | cenix:219-a8 | |||||
| mv_D1044.3 | ||||||
| sjj2_D1044.7 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA | elegans_PE_SS_GG2465|c1_g1_i1 | Inferred_automatically | transcript_builder.pl | |||
| yk383b11.5 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_244952 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF30011H02 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_5608 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG2465|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_170290 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_268725 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00043374 | |||||
| WBRNAi00002201 | ||||||
| Microarray_results (17) | ||||||
| Brief_identification | EB domain-containing protein | Accession_evidence | UniProt | TR:Q95QP8 | ||
| RNASeq_FPKM (74) | ||||||
| Last_reviewed | 21 May 2001 00:00:00 | WBPerson615 | ||||
| Remark | [010521 js] split from D1044.3 based on EST data - | Curator_confirmed | WBPerson615 | |||
| Method | curated |
