WormBase Tree Display for CDS: C17C3.1b
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| C17C3.1b | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C17C3 | |||
| Structure | Source_exons | 1 | 56 | |||
| 285 | 392 | |||||
| 440 | 585 | |||||
| 966 | 1404 | |||||
| 1940 | 2231 | |||||
| DB_info | Database | KEGG | KEGG_id | 3.1.2.2 | ||
| TrEMBL | UniProtAcc | H2KYT6 | ||||
| UniProt | UniProtAcc | H2KYT6 | ||||
| AlphaFold | entry | H2KYT6 | ||||
| NCBI_protein | GI_number | GI:351050289 | ||||
| Protein_id | CHROMOSOME_II | CCD64830 | 1 | |||
| DB_remark | contains similarity to Pfam domains PF13622 (Acyl-CoA thioesterase N-terminal domain), PF20789 (Acyl-CoA thioesterase C-terminal domain); contains similarity to Interpro domains IPR003703 (Acyl-CoA thioesterase), IPR029069 (HotDog domain superfamily), IPR042171 (Acyl-CoA thioesterase, double hotdog domain), IPR049450 (Acyl-CoA thioesterase-like, C-terminal domain), IPR049449 (Acyl-CoA thioesterase-like, N-terminal HotDog domain) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Isoform | Accession_evidence | EMBL | C46239 | |||
| Visible | Gene | WBGene00015887 | ||||
| Corresponding_transcript | C17C3.1b.1 | |||||
| Corresponding_protein | CE27071 | |||||
| Corresponding_PCR_product | cenix:158-b1 | |||||
| cenix:208-a4 | ||||||
| mv_C17C3.1 | ||||||
| sjj2_C17C3.1a | ||||||
| sjj_C17C3.1 | ||||||
| Corresponding_oligo_set (26) | ||||||
| Matching_cDNA (30) | ||||||
| RNAi_result | WBRNAi00040779 | |||||
| WBRNAi00023055 | ||||||
| WBRNAi00040780 | ||||||
| WBRNAi00023945 | ||||||
| WBRNAi00010898 | ||||||
| WBRNAi00023145 | ||||||
| WBRNAi00023657 | ||||||
| Microarray_results (32) | ||||||
| Brief_identification | palmitoyl-CoA hydrolase | Accession_evidence | UniProt | TR:H2KYT6 | ||
| RNASeq_FPKM (74) | ||||||
| Remark | genefinder originally predicted this as two genes | |||||
| Method | curated |
