WormBase Tree Display for CDS: B0280.1a

B0280.1a Evidence: Inferred_automatically: make_isoforms.pl
  SMap: S_parent: Sequence: B0280
  Structure: Source_exons: 1 3
      51 176
      231 305
      361 589
      642 917
      963 1126
      2392 2526
  DB_info: Database: KEGG KEGG_id 2.5.1.60
      SwissProt UniProtAcc P41992
        UniProtIsoformAcc P41992-1
      UniProt UniProtAcc P41992
      UniProt_GCRP UniProtAcc P41992
      AlphaFold entry P41992
      NCBI_protein GI_number GI:351065616
      TREEFAM TREEFAM_ID TF105762
    Protein_id: CHROMOSOME_III CCD61597 1
    DB_remark: GGTB-1 protein; contains similarity to Pfam domain PF00432 (Prenyltransferase and squalene oxidase repeat); contains similarity to Interpro domains IPR045089 (Prenyltransferase subunit beta), IPR008930 (Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid), IPR001330 (PFTB repeat)
  Origin: From_laboratory: RW
    Species: Caenorhabditis elegans
  Properties: Coding: CDS
      Prediction_status: Confirmed
    Isoform: Accession_evidence: EMBL AV177661
  Visible: Gene: WBGene00015099
    Corresponding_transcript: B0280.1a.1
    Corresponding_protein: CE24762
    Corresponding_PCR_product (12)
    Corresponding_oligo_set (24)
    Matching_cDNA (63)
    RNAi_result (24)
    Microarray_results (27)
    Brief_identification: Probable geranylgeranyl transferase type-2 subunit beta Accession_evidence: UniProt SP:P41992
    RNASeq_FPKM (74)
    Last_reviewed: 17 Nov 2005 00:00:00 WBPerson1867
    Remark: [991230 db] added new last exon based on EST data Curator_confirmed: WBPerson1848
  Method: curated