WormBase Tree Display for CDS: Bm5890b
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Bm5890b | SMap | S_parent | Sequence | Bm_v4_Chr1_scaffold_001 | |
---|---|---|---|---|---|
Structure | Source_exons | 1 | 68 | ||
3911 | 4085 | ||||
7546 | 7650 | ||||
8442 | 8581 | ||||
11191 | 11273 | ||||
13807 | 13953 | ||||
15705 | 15904 | ||||
16178 | 16233 | ||||
16480 | 16642 | ||||
17549 | 17593 | ||||
17927 | 18131 | ||||
18504 | 18551 | ||||
19633 | 19782 | ||||
20158 | 20387 | ||||
20492 | 20657 | ||||
20736 | 20875 | ||||
21166 | 21258 | ||||
DB_info | Database | TrEMBL | UniProtAcc | A0A0J9YAN6 | |
UniProt | UniProtAcc | A0A0J9YAN6 | |||
AlphaFold | entry | A0A0J9YAN6 | |||
Protein_id | Bm_v4_Chr1_scaffold_001 | CDQ05859 | 1 | ||
DB_remark | contains similarity to Pfam domains PF02931 (Neurotransmitter-gated ion-channel ligand binding domain), PF02932 (Neurotransmitter-gated ion-channel transmembrane region); contains similarity to Interpro domains IPR038050 (Neuronal acetylcholine receptor), IPR036719 (Neurotransmitter-gated ion-channel transmembrane domain superfamily), IPR036734 (Neurotransmitter-gated ion-channel ligand-binding domain superfamily), IPR006028 (Gamma-aminobutyric acid A receptor/Glycine receptor alpha), IPR006201 (Neurotransmitter-gated ion-channel), IPR006202 (Neurotransmitter-gated ion-channel ligand-binding domain), IPR006029 (Neurotransmitter-gated ion-channel transmembrane domain) | ||||
Origin | From_laboratory | HX | |||
Species | Brugia malayi | ||||
Properties | Coding | CDS | |||
CDS_predicted_by | augustus | ||||
Prediction_status | Partially_confirmed | ||||
Isoform | Inferred_automatically | xace | |||
Visible (6) | |||||
Method | curated |