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WormBase Tree Display for CDS: VW02B12L.1

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Name Class

VW02B12L.1EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceCHROMOSOME_II
StructureSource_exons1196
554899
9472131
21782394
24402818
28683142
DB_infoDatabaseSwissProtUniProtAccG5EGP4
UniProtUniProtAccG5EGP4
UniProt_GCRPUniProtAccG5EGP4
AlphaFoldentryG5EGP4
NCBI_proteinGI_numberGI:3873626
TREEFAMTREEFAM_IDTF300346
Protein_idCHROMOSOME_IICAA203341
DB_remarkVHA-6 protein; contains similarity to Pfam domain PF01496 (V-type ATPase 116kDa subunit family); contains similarity to Interpro domains IPR026028 (ATPase, V0 complex, subunit 116kDa, eukaryotic), IPR002490 (V-type ATPase, V0 complex, 116kDa subunit family)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00006915
Corresponding_transcriptVW02B12L.1.1
Corresponding_proteinCE18980
Corresponding_PCR_productcenix:200-h9
mv_VW02B12L.1
sjj_C05D12.6
sjj_VW02B12L.1
Corresponding_oligo_set (17)
Matching_cDNA (257)
RNAi_resultWBRNAi00096854
WBRNAi00066248
WBRNAi00096665
WBRNAi00106143
WBRNAi00096804
WBRNAi00096808
WBRNAi00066220
WBRNAi00096217
WBRNAi00096805
WBRNAi00106557
WBRNAi00008348
WBRNAi00106529
WBRNAi00095988
WBRNAi00066254
WBRNAi00066174
WBRNAi00009235
WBRNAi00096803
WBRNAi00106078
WBRNAi00096294
WBRNAi00111095
WBRNAi00096744
WBRNAi00096599
WBRNAi00102727
WBRNAi00096837
WBRNAi00066281
WBRNAi00090912
WBRNAi00096722
WBRNAi00106512
WBRNAi00096666
WBRNAi00065030
WBRNAi00095911
WBRNAi00096664
WBRNAi00036121
WBRNAi00096868
WBRNAi00096771
WBRNAi00096862
WBRNAi00096140
WBRNAi00096596
WBRNAi00096806
WBRNAi00070603
WBRNAi00054473
WBRNAi00026433
WBRNAi00095749
WBRNAi00096724
WBRNAi00096743
WBRNAi00096745
WBRNAi00096809
WBRNAi00096726
WBRNAi00096801
WBRNAi00096802
WBRNAi00066302
WBRNAi00096773
WBRNAi00096799
WBRNAi00096063
WBRNAi00096807
Microarray_results (20)
Brief_identificationV-type proton ATPase 116 kDa subunit a 3Accession_evidenceUniProtSP:G5EGP4
RNASeq_FPKM (74)
Associated_featureWBsf000024
Methodcurated