WormBase Tree Display for CDS: T27A3.6
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| T27A3.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T27A3 | |||
| Structure | Source_exons | 1 | 87 | |||
| 231 | 290 | |||||
| 716 | 934 | |||||
| 981 | 1101 | |||||
| 1147 | 1306 | |||||
| 1356 | 1731 | |||||
| DB_info | Database | KEGG | KEGG_id | 2.8.1.12 | ||
| TrEMBL | UniProtAcc | P91500 | ||||
| UniProt | UniProtAcc | P91500 | ||||
| UniProt_GCRP | UniProtAcc | P91500 | ||||
| AlphaFold | entry | P91500 | ||||
| NCBI_protein | GI_number | GI:351063783 | ||||
| TREEFAM | TREEFAM_ID | TF105395 | ||||
| Protein_id | CHROMOSOME_I | CCD72006 | 1 | |||
| DB_remark | NMRK-1 protein; contains similarity to Pfam domain PF02391 (MoaE protein); contains similarity to Interpro domains IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR003448 (Molybdopterin biosynthesis MoaE), IPR036563 (Molybdopterin biosynthesis MoaE subunit superfamily) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00020842 | ||||
| Corresponding_transcript | T27A3.6.1 | |||||
| Corresponding_protein | CE14227 | |||||
| Corresponding_PCR_product | cenix:52-d5 | |||||
| cenix:89-f3 | ||||||
| mv_T27A3.6 | ||||||
| sjj_T27A3.6 | ||||||
| Corresponding_oligo_set (20) | ||||||
| Matching_cDNA (36) | ||||||
| RNAi_result | WBRNAi00054263 | |||||
| WBRNAi00054264 | ||||||
| WBRNAi00036016 | ||||||
| WBRNAi00004319 | ||||||
| WBRNAi00076715 | ||||||
| WBRNAi00103547 | ||||||
| WBRNAi00116636 | ||||||
| Microarray_results | SMD_T27A3.6 | |||||
| 182114_at | ||||||
| A_12_P112489 | ||||||
| A_12_P176999 | ||||||
| A_12_P177000 | ||||||
| Aff_T27A3.6 | ||||||
| GPL13394_WBGene00020842 | ||||||
| GPL13914_T27A3.6 | ||||||
| GPL14144_T27A3.6_24-83_0.877_20_C | ||||||
| GPL14144_T27A3.6_849-908_0.925_4_A | ||||||
| GPL14144_T27A3.6_948-1007_0.864_29_B | ||||||
| GPL19516_CGZ0037047 | ||||||
| GPL21109_T27A3.6 | ||||||
| GPL3518_CE14227 | ||||||
| GPL8304_CE_WBGene00020842_A | ||||||
| GPL8304_CE_WBGene00020842_C | ||||||
| GPL8673_T27A3_6P00308 | ||||||
| GPL8673_T27A3_6P00459 | ||||||
| GPL8673_T27A3_6P00659 | ||||||
| GPL9450_T27A3.6 | ||||||
| cea2.i.04880 | ||||||
| Brief_identification | Molybdopterin synthase catalytic subunit | Accession_evidence | UniProt | TR:P91500 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf123656 | |||||
| Method | curated |
