WormBase Tree Display for CDS: T01B7.4
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| T01B7.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T01B7 | |||
| Structure | Source_exons | 1 | 102 | |||
| 157 | 315 | |||||
| 361 | 541 | |||||
| 979 | 1088 | |||||
| DB_info | Database | KEGG | KEGG_id | 5.2.1.8 | ||
| SwissProt | UniProtAcc | P52018 | ||||
| UniProt | UniProtAcc | P52018 | ||||
| UniProt_GCRP | UniProtAcc | P52018 | ||||
| AlphaFold | entry | P52018 | ||||
| NCBI_protein | GI_number | GI:3879232 | ||||
| TREEFAM | TREEFAM_ID | TF312958 | ||||
| Protein_id | CHROMOSOME_II | CAA91297 | 1 | |||
| DB_remark | CYN-11 protein; contains similarity to Pfam domain PF00160 (Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD); contains similarity to Interpro domains IPR029000 (Cyclophilin-like domain superfamily), IPR024936 (Cyclophilin-type peptidyl-prolyl cis-trans isomerase), IPR002130 (Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00000887 | ||||
| Corresponding_transcript | T01B7.4.1 | |||||
| Corresponding_protein | CE03588 | |||||
| Corresponding_PCR_product | cenix:211-b5 | |||||
| mv_AAC47115 | ||||||
| mv_T01B7.4 | ||||||
| sjj_T01B7.4 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA (48) | ||||||
| RNAi_result | WBRNAi00103495 | |||||
| WBRNAi00062346 | ||||||
| WBRNAi00017940 | ||||||
| WBRNAi00080136 | ||||||
| WBRNAi00027812 | ||||||
| WBRNAi00112131 | ||||||
| WBRNAi00062347 | ||||||
| WBRNAi00052082 | ||||||
| WBRNAi00080048 | ||||||
| WBRNAi00076625 | ||||||
| Microarray_results | SMD_T01B7.4 | |||||
| 193708_s_at | ||||||
| A_12_P116359 | ||||||
| Aff_T01B7.4 | ||||||
| GPL13394_WBGene00000887 | ||||||
| GPL13914_T01B7.4 | ||||||
| GPL14144_T01B7.4_199-258_0.929_2_B | ||||||
| GPL14144_T01B7.4_290-349_0.926_3_A | ||||||
| GPL14144_T01B7.4_355-414_0.922_6_C | ||||||
| GPL19516_CGZ0032542 | ||||||
| GPL21109_T01B7.4 | ||||||
| GPL3518_CE03588 | ||||||
| GPL8304_CE_WBGene00000887_A | ||||||
| GPL8673_T01B7_4P00079 | ||||||
| GPL8673_T01B7_4P00229 | ||||||
| GPL8673_T01B7_4P00319 | ||||||
| GPL9450_T01B7.4 | ||||||
| cea2.c.13826 | ||||||
| Brief_identification | Peptidyl-prolyl cis-trans isomerase 11 | Accession_evidence | UniProt | SP:P52018 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf019389 | |||||
| Method | curated |
