WormBase Tree Display for CDS: R166.2
expand all nodes | collapse all nodes | view schema
R166.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | R166 | |||
Structure | Source_exons | 1 | 123 | |||
176 | 310 | |||||
364 | 459 | |||||
507 | 644 | |||||
1410 | 1538 | |||||
1593 | 2633 | |||||
2938 | 3132 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q22003 | ||
UniProt | UniProtAcc | Q22003 | ||||
UniProt_GCRP | UniProtAcc | Q22003 | ||||
AlphaFold | entry | Q22003 | ||||
NCBI_protein | GI_number | GI:3879192 | ||||
TREEFAM | TREEFAM_ID | TF318501 | ||||
Protein_id | CHROMOSOME_II | CAA90663 | 1 | |||
DB_remark | contains similarity to Pfam domain PF05602 (Cleft lip and palate transmembrane protein 1 (CLPTM1)); contains similarity to Interpro domain IPR008429 (Cleft lip and palate transmembrane 1) | |||||
Origin | From_laboratory | HX | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00011302 | ||||
Corresponding_transcript | R166.2.1 | |||||
Corresponding_protein | CE03581 | |||||
Corresponding_PCR_product | cenix:20-g7 | |||||
mv_R166.2 | ||||||
sjj_R166.2 | ||||||
Corresponding_oligo_set (13) | ||||||
Matching_cDNA (97) | ||||||
RNAi_result | WBRNAi00051998 | |||||
WBRNAi00034947 | ||||||
WBRNAi00076621 | ||||||
WBRNAi00017884 | ||||||
Microarray_results | SMD_R166.2 | |||||
177384_s_at | ||||||
A_12_P117754 | ||||||
Aff_R166.2 | ||||||
GPL13394_WBGene00011302 | ||||||
GPL13914_R166.2 | ||||||
GPL14144_R166.2_1228-1287_0.912_21_C | ||||||
GPL14144_R166.2_1297-1356_0.931_6_A | ||||||
GPL14144_R166.2_1492-1551_0.949_1_B | ||||||
GPL3518_CE03581 | ||||||
GPL8304_CE_WBGene00011302_A | ||||||
GPL8673_R166_2P00404 | ||||||
GPL8673_R166_2P00859 | ||||||
GPL8673_R166_2P01659 | ||||||
Brief_identification | Cleft lip and palate transmembrane protein 1 homolog | Accession_evidence | UniProt | TR:Q22003 | ||
RNASeq_FPKM (74) | ||||||
Associated_feature | WBsf002573 | |||||
Method | curated |