WormBase Tree Display for CDS: C14F11.6
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C14F11.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C14F11 | |||
Structure | Source_exons | 1 | 87 | |||
152 | 241 | |||||
295 | 372 | |||||
466 | 673 | |||||
719 | 828 | |||||
DB_info | Database | TrEMBL | UniProtAcc | Q17993 | ||
UniProt | UniProtAcc | Q17993 | ||||
UniProt_GCRP | UniProtAcc | Q17993 | ||||
AlphaFold | entry | Q17993 | ||||
NCBI_protein | GI_number | GI:351057940 | ||||
Protein_id | CHROMOSOME_X | CCD64543 | 1 | |||
DB_remark | RML-3 protein; contains similarity to Pfam domain PF00908 (dTDP-4-dehydrorhamnose 3,5-epimerase); contains similarity to Interpro domains IPR000888 (dTDP-4-dehydrorhamnose 3,5-epimerase-like), IPR011051 (RmlC-like cupin domain superfamily), IPR014710 (RmlC-like jelly roll fold) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00015781 | ||||
Corresponding_transcript | C14F11.6.1 | |||||
Corresponding_protein | CE02482 | |||||
Corresponding_PCR_product | cenix:31-c6 | |||||
mv_C14F11.6 | ||||||
sjj2_C14F11.6 | ||||||
sjj_C14F11.6 | ||||||
Corresponding_oligo_set (18) | ||||||
Matching_cDNA (47) | ||||||
RNAi_result | WBRNAi00040560 | |||||
WBRNAi00028900 | ||||||
Microarray_results | SMD_C14F11.6 | |||||
193712_s_at | ||||||
A_12_P112300 | ||||||
Aff_C14F11.6 | ||||||
GPL13394_WBGene00015781 | ||||||
GPL13914_C14F11.6 | ||||||
GPL14144_C14F11.6_305-364_0.961_2_A | ||||||
GPL14144_C14F11.6_382-441_0.941_7_B | ||||||
GPL14144_C14F11.6_94-153_0.883_23_C | ||||||
GPL19516_CGZ0004642 | ||||||
GPL19516_CGZ0004643 | ||||||
GPL21109_C14F11.6.1 | ||||||
GPL3518_CE02482 | ||||||
GPL8304_CE_WBGene00015781_A | ||||||
GPL8304_CE_WBGene00015781_C | ||||||
GPL8673_C14F11_6P00230 | ||||||
GPL8673_C14F11_6P00303 | ||||||
GPL8673_C14F11_6P00399 | ||||||
GPL9450_C14F11.6 | ||||||
cea2.c.41347 | ||||||
Brief_identification | dTDP-4-dehydrorhamnose 3,5-epimerase | Accession_evidence | UniProt | TR:Q17993 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |