WormBase Tree Display for CDS: T27A3.6
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| T27A3.6 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T27A3 | |||
| Structure | Source_exons | 1 | 87 | |||
| 231 | 290 | |||||
| 716 | 934 | |||||
| 981 | 1101 | |||||
| 1147 | 1306 | |||||
| 1356 | 1731 | |||||
| DB_info | Database | KEGG | KEGG_id | 2.8.1.12 | ||
| TrEMBL | UniProtAcc | P91500 | ||||
| UniProt | UniProtAcc | P91500 | ||||
| UniProt_GCRP | UniProtAcc | P91500 | ||||
| AlphaFold | entry | P91500 | ||||
| NCBI_protein | GI_number | GI:351063783 | ||||
| TREEFAM | TREEFAM_ID | TF105395 | ||||
| Protein_id | CHROMOSOME_I | CCD72006 | 1 | |||
| DB_remark | NMRK-1 protein; contains similarity to Pfam domain PF02391 (MoaE protein); contains similarity to Interpro domains IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR003448 (Molybdopterin biosynthesis MoaE), IPR036563 (Molybdopterin biosynthesis MoaE subunit superfamily) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00020842 | ||||
| Corresponding_transcript | T27A3.6.1 | |||||
| Corresponding_protein | CE14227 | |||||
| Corresponding_PCR_product | cenix:52-d5 | |||||
| cenix:89-f3 | ||||||
| mv_T27A3.6 | ||||||
| sjj_T27A3.6 | ||||||
| Corresponding_oligo_set (20) | ||||||
| Matching_cDNA | male_Nanopore_Roach_100518 | Inferred_automatically | transcript_builder.pl | |||
| young_adult_Nanopore_Roach_3996 | Inferred_automatically | transcript_builder.pl | ||||
| young_adult_Nanopore_Roach_48376 | Inferred_automatically | transcript_builder.pl | ||||
| young_adult_Nanopore_Roach_93097 | ||||||
| L3_Nanopore_Roach_71770 | ||||||
| male_Nanopore_Roach_47619 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_42924 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_74084 | ||||||
| L3_Nanopore_Roach_40833 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_3785 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_41834 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_63193 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_78522 | ||||||
| adult_Nanopore_Roach_41108 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_5640 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_20263 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_3401 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_27108 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_77739 | ||||||
| adult_Nanopore_Roach_75338 | ||||||
| L3_Nanopore_Roach_70891 | ||||||
| L1_Nanopore_Li_198290 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_113557 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_225765 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG1913|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_187663 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF080A9_1 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_250832 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_191757 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_100171 | Inferred_automatically | transcript_builder.pl | ||||
| FN897485 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_190178 | Inferred_automatically | transcript_builder.pl | ||||
| FN884569 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_261904 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_228842 | Inferred_automatically | transcript_builder.pl | ||||
| EC008637 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00054263 | |||||
| WBRNAi00054264 | ||||||
| WBRNAi00036016 | ||||||
| WBRNAi00004319 | ||||||
| WBRNAi00076715 | ||||||
| WBRNAi00103547 | ||||||
| WBRNAi00116636 | ||||||
| Microarray_results (21) | ||||||
| Brief_identification | Molybdopterin synthase catalytic subunit | Accession_evidence | UniProt | TR:P91500 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf123656 | |||||
| Method | curated |
