WormBase Tree Display for CDS: T23G7.3
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| T23G7.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T23G7 | |||
| Structure | Source_exons | 1 | 83 | |||
| 130 | 432 | |||||
| 482 | 989 | |||||
| 1607 | 1732 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q22705 | ||
| UniProt | UniProtAcc | Q22705 | ||||
| UniProt_GCRP | UniProtAcc | Q22705 | ||||
| AlphaFold | entry | Q22705 | ||||
| NCBI_protein | GI_number | GI:3880143 | ||||
| TREEFAM | TREEFAM_ID | TF321918 | ||||
| Protein_id | CHROMOSOME_II | CAA92701 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF01585 (G-patch domain); contains similarity to Interpro domain IPR000467 (G-patch domain) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00011966 | ||||
| Corresponding_transcript | T23G7.3.1 | |||||
| Corresponding_protein | CE03704 | |||||
| Corresponding_PCR_product | cenix:200-e9 | |||||
| mv_T23G7.3 | ||||||
| sjj_T23G7.3 | ||||||
| Corresponding_oligo_set (18) | ||||||
| Matching_cDNA | young_adult_Nanopore_Roach_3091 | Inferred_automatically | transcript_builder.pl | |||
| young_adult_Nanopore_Roach_6065 | Inferred_automatically | transcript_builder.pl | ||||
| young_adult_Nanopore_Roach_49217 | Inferred_automatically | transcript_builder.pl | ||||
| young_adult_Nanopore_Roach_115517 | ||||||
| young_adult_Nanopore_Roach_121609 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_1876 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_3093 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_41450 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_5124 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_42503 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_85109 | ||||||
| L3_Nanopore_Roach_84681 | ||||||
| L1_Nanopore_Roach_90810 | ||||||
| L1_Nanopore_Roach_90458 | ||||||
| adult_Nanopore_Roach_41782 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_27520 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_92212 | ||||||
| male_Nanopore_Roach_3183 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_91855 | ||||||
| L3_Nanopore_Roach_5260 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_3427 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_48365 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_3205 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_5409 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_5713 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_43537 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_2624 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_5886 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_93437 | ||||||
| yk203h10.5 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_162589 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_141196 | Inferred_automatically | transcript_builder.pl | ||||
| OSTR117C3_1 | Inferred_automatically | transcript_builder.pl | ||||
| yk1151c11.3 | Inferred_automatically | transcript_builder.pl | ||||
| yk542a9.3 | Inferred_automatically | transcript_builder.pl | ||||
| FN896566 | Inferred_automatically | transcript_builder.pl | ||||
| yk542a9.5 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_190562 | Inferred_automatically | transcript_builder.pl | ||||
| FN873905 | Inferred_automatically | transcript_builder.pl | ||||
| yk387f3.3 | Inferred_automatically | transcript_builder.pl | ||||
| yk387f3.5 | Inferred_automatically | transcript_builder.pl | ||||
| yk444f5.3 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_245243 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_168894 | Inferred_automatically | transcript_builder.pl | ||||
| yk1151c11.5 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG3154|c1_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| CK583147 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_138976 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG3154|c1_g1_i2 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_192119 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_163135 | Inferred_automatically | transcript_builder.pl | ||||
| yk158g6.5 | Inferred_automatically | transcript_builder.pl | ||||
| EC000534 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_68881 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_188344 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_159738 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_186431 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_279652 | Inferred_automatically | transcript_builder.pl | ||||
| yk444f5.5 | Inferred_automatically | transcript_builder.pl | ||||
| yk266a2.5 | Inferred_automatically | transcript_builder.pl | ||||
| FN883833 | Inferred_automatically | transcript_builder.pl | ||||
| yk680f11.5 | Inferred_automatically | transcript_builder.pl | ||||
| FN876614 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_253417 | Inferred_automatically | transcript_builder.pl | ||||
| yk197e1.5 | Inferred_automatically | transcript_builder.pl | ||||
| FN896714 | Inferred_automatically | transcript_builder.pl | ||||
| FN895842 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF117C3_1 | Inferred_automatically | transcript_builder.pl | ||||
| FN872543 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_58104 | Inferred_automatically | transcript_builder.pl | ||||
| yk66e10.5 | Inferred_automatically | transcript_builder.pl | ||||
| FN873224 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00019110 | |||||
| WBRNAi00035892 | ||||||
| WBRNAi00000967 | ||||||
| WBRNAi00053983 | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | G-patch domain-containing protein | Accession_evidence | UniProt | TR:Q22705 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf003811 | |||||
| Method | curated |
