WormBase Tree Display for CDS: R07E3.4
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| R07E3.4 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | R07E3 | |||
| Structure | Source_exons | 1 | 126 | |||
| 196 | 273 | |||||
| 322 | 469 | |||||
| 518 | 695 | |||||
| 742 | 999 | |||||
| 1048 | 1156 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q21809 | ||
| UniProt | UniProtAcc | Q21809 | ||||
| UniProt_GCRP | UniProtAcc | Q21809 | ||||
| AlphaFold | entry | Q21809 | ||||
| NCBI_protein | GI_number | GI:3878957 | ||||
| TREEFAM | TREEFAM_ID | TF300743 | ||||
| Protein_id | CHROMOSOME_X | CAA89069 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF00153 (Mitochondrial carrier protein); contains similarity to Interpro domains IPR002067 (Mitochondrial carrier protein), IPR023395 (Mitochondrial carrier domain superfamily), IPR018108 (Mitochondrial substrate/solute carrier), IPR002113 (ADP/ATP carrier protein, eukaryotic type) | |||||
| Origin (2) | ||||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00011105 | ||||
| Corresponding_transcript | R07E3.4.1 | |||||
| R07E3.4.2 | ||||||
| Corresponding_protein | CE02298 | |||||
| Corresponding_PCR_product | cenix:13-h2 | |||||
| mv_R07E3.4 | ||||||
| sjj_R07E3.4 | ||||||
| Corresponding_oligo_set (17) | ||||||
| Matching_cDNA | male_Nanopore_Roach_101412 | |||||
| male_Nanopore_Roach_109730 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_151171 | Inferred_automatically | transcript_builder.pl | ||||
| young_adult_Nanopore_Roach_12634 | ||||||
| young_adult_Nanopore_Roach_51817 | Inferred_automatically | transcript_builder.pl | ||||
| young_adult_Nanopore_Roach_88367 | Inferred_automatically | transcript_builder.pl | ||||
| young_adult_Nanopore_Roach_98380 | Inferred_automatically | transcript_builder.pl | ||||
| young_adult_Nanopore_Roach_124630 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_73183 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_102557 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_76893 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_81263 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_99124 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_64569 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_43955 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_98228 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_9848 | ||||||
| male_Nanopore_Roach_4425 | ||||||
| L4_Nanopore_Roach_53188 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_93200 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_44864 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_5665 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_44571 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_43312 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_69819 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_69507 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_92847 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_65680 | Inferred_automatically | transcript_builder.pl | ||||
| adult_Nanopore_Roach_7111 | ||||||
| L4_Nanopore_Roach_50525 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_314141 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_166869 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_59695 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_192994 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_154364 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_72506 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_163918 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG557|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_273112 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_294421 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF209H3_1 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_268715 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_172779 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_314091 | Inferred_automatically | transcript_builder.pl | ||||
| EM_Nanopore_Li_308843 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_199993 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_142488 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_299212 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00034706 | |||||
| WBRNAi00017548 | ||||||
| WBRNAi00051467 | ||||||
| Microarray_results (18) | ||||||
| Brief_identification | ADP/ATP translocase | Accession_evidence | UniProt | TR:Q21809 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf017009 | |||||
| Method | curated |
