WormBase Tree Display for CDS: F14B8.2
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F14B8.2 | SMap | S_parent | Sequence | F14B8 | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 54 | |||
100 | 249 | |||||
DB_info | Database | SwissProt | UniProtAcc | Q19443 | ||
UniProt | UniProtAcc | Q19443 | ||||
UniProt_GCRP | UniProtAcc | Q19443 | ||||
AlphaFold | entry | Q19443 | ||||
NCBI_protein | GI_number | GI:351050230 | ||||
Protein_id | CHROMOSOME_X | CCD64773 | 1 | |||
DB_remark | SID-5 protein; contains similarity to Pfam domain PF17204 (Sid-5 family); contains similarity to Interpro domain IPR033759 (Systemic RNA interference defective protein 5) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00017445 | ||||
Corresponding_transcript | F14B8.2.1 | |||||
Corresponding_protein | CE02645 | |||||
Corresponding_PCR_product | cenix:243-b11 | |||||
mv_F14B8.2 | ||||||
sjj_F14B8.2 | ||||||
Corresponding_oligo_set (16) | ||||||
Matching_cDNA | male_Nanopore_Roach_146177 | Inferred_automatically | transcript_builder.pl | |||
young_adult_Nanopore_Roach_27643 | ||||||
young_adult_Nanopore_Roach_119190 | Inferred_automatically | transcript_builder.pl | ||||
L2_Nanopore_Roach_94052 | Inferred_automatically | transcript_builder.pl | ||||
L2_Nanopore_Roach_25004 | ||||||
adult_Nanopore_Roach_98010 | Inferred_automatically | transcript_builder.pl | ||||
male_Nanopore_Roach_27691 | ||||||
L4_Nanopore_Roach_61759 | Inferred_automatically | transcript_builder.pl | ||||
L1_Nanopore_Roach_94722 | Inferred_automatically | transcript_builder.pl | ||||
L3_Nanopore_Roach_24038 | ||||||
L1_Nanopore_Roach_24102 | ||||||
L3_Nanopore_Roach_89289 | Inferred_automatically | transcript_builder.pl | ||||
OSTF201E4_1 | Inferred_automatically | transcript_builder.pl | ||||
elegans_PE_SS_GG4625|c0_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
YA_Nanopore_Li_165720 | Inferred_automatically | transcript_builder.pl | ||||
L1_Nanopore_Li_52489 | Inferred_automatically | transcript_builder.pl | ||||
EM_Nanopore_Li_159157 | Inferred_automatically | transcript_builder.pl | ||||
OSTR201E4_1 | Inferred_automatically | transcript_builder.pl | ||||
elegans_PE_SS_GG4625|c0_g2_i1 | Inferred_automatically | transcript_builder.pl | ||||
L1_Nanopore_Li_136159 | Inferred_automatically | transcript_builder.pl | ||||
RNAi_result | WBRNAi00044577 | |||||
WBRNAi00030928 | ||||||
WBRNAi00013257 | ||||||
Microarray_results (17) | ||||||
Brief_identification | Systemic RNA interference defective protein 5 | Accession_evidence | UniProt | SP:Q19443 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |