WormBase Tree Display for CDS: B0491.3
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| B0491.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | B0491 | |||
| Structure | Source_exons | 1 | 3 | |||
| 53 | 121 | |||||
| 381 | 881 | |||||
| 929 | 1033 | |||||
| DB_info | Database | TrEMBL | UniProtAcc | Q17510 | ||
| UniProt | UniProtAcc | Q17510 | ||||
| UniProt_GCRP | UniProtAcc | Q17510 | ||||
| AlphaFold | entry | Q17510 | ||||
| NCBI_protein | GI_number | GI:3873802 | ||||
| TREEFAM | TREEFAM_ID | TF315854 | ||||
| Protein_id | CHROMOSOME_II | CAA90085 | 1 | |||
| DB_remark | RMD-3 protein; contains similarity to Pfam domain PF21033 (Regulator of microtubule dynamics protein 1-3); contains similarity to Interpro domains IPR011990 (Tetratricopeptide-like helical domain superfamily), IPR049039 (Regulator of microtubule dynamics protein 1-3, alpha helical repeats) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00007190 | ||||
| Corresponding_transcript | B0491.3.1 | |||||
| Corresponding_protein | CE02105 | |||||
| Corresponding_PCR_product | cenix:200-c12 | |||||
| mv_B0491.3 | ||||||
| sjj_B0491.3 | ||||||
| smd_B0491.3 | ||||||
| Corresponding_oligo_set (14) | ||||||
| Matching_cDNA | male_Nanopore_Roach_103926 | Inferred_automatically | transcript_builder.pl | |||
| male_Nanopore_Roach_104315 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_133924 | ||||||
| male_Nanopore_Roach_135340 | ||||||
| male_Nanopore_Roach_139888 | ||||||
| young_adult_Nanopore_Roach_37065 | Inferred_automatically | transcript_builder.pl | ||||
| young_adult_Nanopore_Roach_38119 | Inferred_automatically | transcript_builder.pl | ||||
| young_adult_Nanopore_Roach_82616 | Inferred_automatically | transcript_builder.pl | ||||
| young_adult_Nanopore_Roach_114315 | ||||||
| L1_Nanopore_Roach_92680 | ||||||
| male_Nanopore_Roach_36404 | Inferred_automatically | transcript_builder.pl | ||||
| L3_Nanopore_Roach_45227 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Roach_46711 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_41835 | Inferred_automatically | transcript_builder.pl | ||||
| male_Nanopore_Roach_37385 | Inferred_automatically | transcript_builder.pl | ||||
| L4_Nanopore_Roach_30391 | Inferred_automatically | transcript_builder.pl | ||||
| L2_Nanopore_Roach_47559 | Inferred_automatically | transcript_builder.pl | ||||
| yk306d2.3 | Inferred_automatically | transcript_builder.pl | ||||
| OSTF062D5_1 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_258691 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_91360 | Inferred_automatically | transcript_builder.pl | ||||
| CEMSH79R | Inferred_automatically | transcript_builder.pl | ||||
| OSTR115D4_1 | Inferred_automatically | transcript_builder.pl | ||||
| CEMSH79F | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_213777 | Inferred_automatically | transcript_builder.pl | ||||
| yk144d8.3 | Inferred_automatically | transcript_builder.pl | ||||
| yk306d2.5 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_236820 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_235886 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_212511 | Inferred_automatically | transcript_builder.pl | ||||
| YA_Nanopore_Li_118921 | Inferred_automatically | transcript_builder.pl | ||||
| L1_Nanopore_Li_2635 | Inferred_automatically | transcript_builder.pl | ||||
| OSTR062D5_1 | Inferred_automatically | transcript_builder.pl | ||||
| elegans_PE_SS_GG2983|c5_g1_i1 | Inferred_automatically | transcript_builder.pl | ||||
| RNAi_result | WBRNAi00039101 | |||||
| WBRNAi00022569 | ||||||
| WBRNAi00009802 | ||||||
| WBRNAi00028165 | ||||||
| WBRNAi00001361 | ||||||
| Microarray_results (16) | ||||||
| Brief_identification | Regulator of microtubule dynamics protein 1 | Accession_evidence | UniProt | TR:Q17510 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
