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WormBase Tree Display for CDS: T21C12.1n

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Name Class

T21C12.1nEvidenceCurator_confirmedWBPerson1983
SMapS_parentSequenceT21C12
StructureSource_exons146
147238
291380
DB_infoDatabaseTrEMBLUniProtAccU4PEJ2
UniProtUniProtAccU4PEJ2
AlphaFoldentryU4PEJ2
NCBI_proteinGI_numberGI:548948858
Protein_idCHROMOSOME_IIICDH931461
DB_remarkUNC-49 protein; contains similarity to Interpro domains IPR038050 (Neuronal acetylcholine receptor), IPR036719 (Neurotransmitter-gated ion-channel transmembrane domain superfamily)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusPartially_confirmed
IsoformCurator_confirmedWBPerson1983
Feature_evidenceWBsf126800
VisibleGeneWBGene00006784
Corresponding_transcriptT21C12.1n.1
Corresponding_proteinCE48682
Corresponding_PCR_productmv_AAD42382
mv_AAD42383
mv_AAD42384
mv_AAD42385
mv_AAD42386
Corresponding_oligo_set175835_at
175836_s_at
A_12_P152390
A_12_P152391
A_12_P152392
A_12_P152393
A_12_P152394
GPL19516_CGZ0035855
GPL19516_CGZ0035857
GPL21109_T21C12.1l
GPL21109_T21C12.1n
GPL3518_CE28082
GPL8673_T21C12_1bP01266
GPL8673_T21C12_1bP01319
GPL8673_T21C12_1bP01382
GPL8673_T21C12_1gP00211
RNAi_resultWBRNAi00027895
WBRNAi00000954
Microarray_results (16)
RNASeq_FPKM (74)
Last_reviewed26 Sep 2013 00:00:00WBPerson1983
Remark[130902 pad] This represents a novel SL1 trans-spliced version of T21C12.1b which has been grossly truncated to 75aa. Caution this might not be real/functional?Curator_confirmedWBPerson1983
Feature_evidenceWBsf126800
Methodcurated