WormBase Tree Display for CDS: H22K11.1
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H22K11.1 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | H22K11 | |||
Structure | Source_exons | 1 | 59 | |||
140 | 416 | |||||
468 | 572 | |||||
626 | 1381 | |||||
DB_info | Database | KEGG | KEGG_id | 3.4.23.- | ||
SwissProt | UniProtAcc | P55956 | ||||
UniProt | UniProtAcc | P55956 | ||||
UniProt_GCRP | UniProtAcc | P55956 | ||||
AlphaFold | entry | P55956 | ||||
NCBI_protein | GI_number | GI:412984028 | ||||
Protein_id | CHROMOSOME_X | CCD72415 | 2 | |||
DB_remark | ASP-3 protein; contains similarity to Pfam domain PF00026 (Eukaryotic aspartyl protease); contains similarity to Interpro domains IPR001461 (Aspartic peptidase A1 family), IPR021109 (Aspartic peptidase domain superfamily), IPR033121 (Peptidase family A1 domain) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00000216 | ||||
Corresponding_transcript | H22K11.1.1 | |||||
Corresponding_protein | CE47856 | |||||
Corresponding_PCR_product | cenix:56-c1 | |||||
mv_H22K11.1 | ||||||
sjj_H22K11.1 | ||||||
smd_H22K11.1 | ||||||
Corresponding_oligo_set | 191956_at | |||||
A_12_P175754 | ||||||
A_12_P175755 | ||||||
A_12_P175756 | ||||||
A_12_P175757 | ||||||
A_12_P175758 | ||||||
Aff_H22K11.1 | ||||||
GPL13914_H22K11.1 | ||||||
GPL14144_H22K11.1_1147-1206_0.943_4_B | ||||||
GPL14144_H22K11.1_884-943_0.939_6_C | ||||||
GPL14144_H22K11.1_976-1035_0.951_1_A | ||||||
GPL19516_CGZ0026547 | ||||||
GPL21109_H22K11.1 | ||||||
GPL3518_CE19495 | ||||||
GPL8673_H22K11_1P00267 | ||||||
GPL8673_H22K11_1P00525 | ||||||
GPL8673_H22K11_1P00718 | ||||||
GPL9450_H22K11.1 | ||||||
cea2.c.46387 | ||||||
Matching_cDNA (182) | ||||||
RNAi_result (20) | ||||||
Microarray_results (24) | ||||||
Brief_identification | Aspartic protease 3 | Accession_evidence | UniProt | SP:P55956 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |