WormBase Tree Display for CDS: F38E1.9
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| F38E1.9 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F38E1 | |||
| Structure | Source_exons | 1 | 88 | |||
| 139 | 251 | |||||
| 307 | 597 | |||||
| 643 | 879 | |||||
| DB_info | Database | SwissProt | UniProtAcc | Q20157 | ||
| UniProt | UniProtAcc | Q20157 | ||||
| UniProt_GCRP | UniProtAcc | Q20157 | ||||
| AlphaFold | entry | Q20157 | ||||
| NCBI_protein | GI_number | GI:412978386 | ||||
| TREEFAM | TREEFAM_ID | TF324895 | ||||
| Protein_id | CHROMOSOME_V | CCD63661 | 2 | |||
| DB_remark | MPDU-1 protein; contains similarity to Pfam domain PF04193 (PQ loop repeat); contains similarity to Interpro domains IPR006603 (PQ-loop repeat), IPR016817 (Mannose-P-dolichol utilization defect 1 protein) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00018181 | ||||
| Corresponding_transcript | F38E1.9.1 | |||||
| Corresponding_protein | CE47834 | |||||
| Corresponding_PCR_product | cenix:147-e11 | |||||
| mv_F38E1.9 | ||||||
| sjj_F38E1.9 | ||||||
| Corresponding_oligo_set | 187558_s_at | |||||
| A_12_P100466 | ||||||
| Aff_F38E1.9 | ||||||
| GPL13394_WBGene00018181 | ||||||
| GPL13914_F38E1.9 | ||||||
| GPL14144_F38E1.9_495-554_0.749_69_C | ||||||
| GPL14144_F38E1.9_582-641_0.891_18_B | ||||||
| GPL14144_F38E1.9_655-714_0.926_8_A | ||||||
| GPL19516_CGZ0020540 | ||||||
| GPL21109_F38E1.9 | ||||||
| GPL3518_CE04527 | ||||||
| GPL8304_CE_WBGene00018181_A | ||||||
| GPL8304_CE_WBGene00018181_C | ||||||
| GPL8673_F38E1_9P00070 | ||||||
| GPL8673_F38E1_9P00232 | ||||||
| GPL8673_F38E1_9P00607 | ||||||
| GPL9450_F38E1.9 | ||||||
| cea2.c.36171 | ||||||
| Matching_cDNA (70) | ||||||
| RNAi_result (35) | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | Mannose-P-dolichol utilization defect 1 protein homolog | Accession_evidence | UniProt | SP:Q20157 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf000691 | |||||
| Method | curated |
