WormBase Tree Display for CDS: F38B6.5b

F38B6.5b SMap: S_parent: Sequence: F38B6
  Structure: Source_exons: 1 84
      184 426
  DB_info: Database: TrEMBL UniProtAcc Q7YZV5
      UniProt UniProtAcc Q7YZV5
      AlphaFold entry Q7YZV5
      NCBI_protein GI_number GI:373219481
    Protein_id: CHROMOSOME_X CCD68213 1
    DB_remark: COL-172 protein; contains similarity to Pfam domain PF01391 (Collagen triple helix repeat (20 copies)); contains similarity to Interpro domain IPR008160 (Collagen triple helix repeat)
  Origin: From_laboratory: RW
    Species: Caenorhabditis elegans
  Properties: Coding: CDS
      Prediction_status: Confirmed
    Isoform: Accession_evidence: EMBL AU198870
  Visible: Gene: WBGene00000745
    Corresponding_transcript: F38B6.5b.1
      F38B6.5b.2
      F38B6.5b.3
    Corresponding_protein: CE34552
    Corresponding_PCR_product: cenix:60-g8
      mv_F38B6.5
      sjj_F38B6.5
    Corresponding_oligo_set: 189803_at
      A_12_P148790
      Aff_F38B6.5
      GPL13394_WBGene00000745
      GPL13914_F38B6.5
      GPL14144_F38B6.5a_656-715_0.951_1_A
      GPL14144_F38B6.5a_673-732_0.937_4_B
      GPL14144_F38B6.5a_692-751_0.930_6_C
      GPL19516_CGZ0020411
      GPL21109_F38B6.5a
      GPL8673_F38B6_5bP00247
      GPL8673_F38B6_5bP00252
      GPL8673_F38B6_5bP00257
      GPL9450_F38B6.5
      cea2.c.44606
    Matching_cDNA (18)
    RNAi_result: WBRNAi00014544
      WBRNAi00031950
      WBRNAi00046689
    Microarray_results (17)
    Brief_identification: Collagen triple helix repeat protein Accession_evidence: UniProt TR:Q7YZV5
    RNASeq_FPKM (74)
  Method: curated