WormBase Tree Display for CDS: F31C3.5
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| F31C3.5 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F31C3 | |||
| Structure | Source_exons | 1 | 414 | |||
| 466 | 594 | |||||
| DB_info | Database | SwissProt | UniProtAcc | O62193 | ||
| UniProt | UniProtAcc | O62193 | ||||
| UniProt_GCRP | UniProtAcc | O62193 | ||||
| AlphaFold | entry | O62193 | ||||
| NCBI_protein | GI_number | GI:3876501 | ||||
| TREEFAM | TREEFAM_ID | TF314359 | ||||
| Protein_id | CHROMOSOME_I | CAB07195 | 1 | |||
| DB_remark | PSF-2 protein; contains similarity to Pfam domain PF05916 (GINS complex protein); contains similarity to Interpro domains IPR036224 (GINS, helical bundle-like domain superfamily), IPR021151 (GINS subunit, domain A), IPR007257 (DNA replication complex GINS protein Psf2) | |||||
| Origin | From_laboratory | HX | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00009287 | ||||
| Corresponding_transcript | F31C3.5.1 | |||||
| Corresponding_protein | CE17734 | |||||
| Corresponding_PCR_product | cenix:94-g11 | |||||
| mv_F31C3.5 | ||||||
| sjj_F31C3.5 | ||||||
| Corresponding_oligo_set | 177574_at | |||||
| 18468903 | ||||||
| A_12_P111465 | ||||||
| Aff_F31C3.5 | ||||||
| GPL13394_WBGene00009287 | ||||||
| GPL13914_F31C3.5 | ||||||
| GPL14144_F31C3.5_168-227_0.936_8_C | ||||||
| GPL14144_F31C3.5_197-256_0.941_7_B | ||||||
| GPL14144_F31C3.5_335-394_0.953_1_A | ||||||
| GPL19516_CGZ0019063 | ||||||
| GPL21109_F31C3.5 | ||||||
| GPL3518_CE17734 | ||||||
| GPL8304_CE_WBGene00009287_A | ||||||
| GPL8304_CE_WBGene00009287_C | ||||||
| GPL8673_F31C3_5P00001 | ||||||
| GPL8673_F31C3_5P00274 | ||||||
| GPL8673_F31C3_5P00458 | ||||||
| GPL9450_F31C3.5 | ||||||
| cea2.i.02097 | ||||||
| Matching_cDNA (20) | ||||||
| RNAi_result | WBRNAi00045997 | |||||
| WBRNAi00031611 | ||||||
| WBRNAi00081363 | ||||||
| WBRNAi00071089 | ||||||
| WBRNAi00000040 | ||||||
| WBRNAi00025337 | ||||||
| WBRNAi00116678 | ||||||
| WBRNAi00025338 | ||||||
| Microarray_results (19) | ||||||
| Brief_identification | Probable DNA replication complex GINS protein PSF2 | Accession_evidence | UniProt | SP:O62193 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
