WormBase Tree Display for CDS: C05D11.5
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| C05D11.5 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C05D11 | |||
| Structure | Source_exons | 1 | 68 | |||
| 362 | 604 | |||||
| 736 | 964 | |||||
| 1050 | 1119 | |||||
| 1211 | 1389 | |||||
| DB_info | Database | KEGG | KEGG_id | 5.3.1.22 | ||
| SwissProt | UniProtAcc | Q11185 | ||||
| UniProt | UniProtAcc | Q11185 | ||||
| UniProt_GCRP | UniProtAcc | Q11185 | ||||
| AlphaFold | entry | Q11185 | ||||
| NCBI_protein | GI_number | GI:351047512 | ||||
| TREEFAM | TREEFAM_ID | TF312858 | ||||
| Protein_id | CHROMOSOME_III | CCD63194 | 1 | |||
| DB_remark | contains similarity to Pfam domain PF01261 (Xylose isomerase-like TIM barrel); contains similarity to Interpro domains IPR036237 (Xylose isomerase-like superfamily), IPR026040 (Hydroxypyruvate isomerase-like), IPR013022 (Xylose isomerase-like, TIM barrel domain) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Confirmed | |||||
| Visible | Gene | WBGene00015483 | ||||
| Corresponding_transcript | C05D11.5.1 | |||||
| Corresponding_protein | CE01135 | |||||
| Corresponding_PCR_product | TH:306B9 | |||||
| cenix:306-b9 | ||||||
| mv_C05D11.5 | ||||||
| sjj_C05D11.5 | ||||||
| Corresponding_oligo_set | 187649_at | |||||
| A_12_P113526 | ||||||
| A_12_P135240 | ||||||
| A_12_P135241 | ||||||
| Aff_C05D11.5 | ||||||
| GPL13394_WBGene00015483 | ||||||
| GPL13914_C05D11.5 | ||||||
| GPL14144_C05D11.5_116-175_0.906_14_B | ||||||
| GPL14144_C05D11.5_252-311_0.921_9_A | ||||||
| GPL14144_C05D11.5_325-384_0.874_27_C | ||||||
| GPL19516_CGZ0002580 | ||||||
| GPL21109_C05D11.5 | ||||||
| GPL3518_CE01135 | ||||||
| GPL8304_CE_WBGene00015483_A | ||||||
| GPL8304_CE_WBGene00015483_C | ||||||
| GPL8673_C05D11_5P00051 | ||||||
| GPL8673_C05D11_5P00271 | ||||||
| GPL8673_C05D11_5P00614 | ||||||
| GPL9450_C05D11.5 | ||||||
| cea2.c.16776 | ||||||
| Matching_cDNA (24) | ||||||
| RNAi_result | WBRNAi00039738 | |||||
| WBRNAi00005475 | ||||||
| WBRNAi00010198 | ||||||
| WBRNAi00090613 | ||||||
| WBRNAi00028496 | ||||||
| Microarray_results (21) | ||||||
| Brief_identification | Putative hydroxypyruvate isomerase | Accession_evidence | UniProt | SP:Q11185 | ||
| RNASeq_FPKM (74) | ||||||
| Method | curated |
