WormBase Tree Display for Sequence: male_Nanopore_Roach_42032
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| male_Nanopore_Roach_42032 | DNA | male_Nanopore_Roach_42032 | 1843 | ||
|---|---|---|---|---|---|
| DB_info | Database | WormBase | |||
| Origin | Life_stage | WBls:0000056 | |||
| Species | Caenorhabditis elegans | ||||
| Read_coverage | 25 | ||||
| Visible | Title | The full-length transcriptome of C. elegans using direct RNA sequencing for life_stage male. From Roach, Sadowski et al. (2019) | |||
| Matching_CDS | C53A5.3 | Inferred_automatically | transcript_builder.pl | ||
| Matching_transcript | C53A5.3.1 | Inferred_automatically | transcript_builder.pl | ||
| Remark | There are 25 entries comprising this consensus structure | ||||
| The cluster of 5' starts (88% : 22 of 25) has been used in this consensus. The 3' end is the median of a cluster of (76% : 19 of 25) ends. | |||||
| Properties | cDNA | cDNA_EST | |||
| EST_5 | |||||
| Homol | Homol_homol | BLAT_Nanopore:CHROMOSOME_V_97 | |||
| BLAT_Nanopore:OVOC_OM1b_125 | |||||
| BLAT_Nanopore:OVOC_OM4_74 | |||||
| BLAT_Nanopore:OVOC_OM1a_14 | |||||
| BLAT_Nanopore:SRAE_chr2_63 | |||||
| BLAT_Nanopore:SRAE_chr1_13 | |||||
| BLAT_Nanopore:SRAE_chr1_42 | |||||
| Method | Nanopore |
