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WormBase Tree Display for Variation: WBVar00143000

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Name Class

WBVar00143000EvidencePaper_evidenceWBPaper00003350
NamePublic_namee156
Other_nameY37D8A.23a.1:c.1148G>A
Y37D8A.23c.1:c.923G>A
CE20226:p.Trp383Ter
Y37D8A.23b.1:c.1148G>A
CE32012:p.Trp308Ter
CE31832:p.Trp383Ter
HGVSgCHROMOSOME_III:g.12948395G>A
Sequence_detailsSMapS_parentSequenceY37D8A
Flanking_sequencesacaatgatgttttcaagctttggttgatgtgaagagcaagggaatggagggatatcgtca
Mapping_targetY37D8A
Type_of_mutationSubstitutionGAPaper_evidenceWBPaper00003350
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
Strain (13)
LaboratoryCB
StatusLive
AffectsGeneWBGene00006762
TranscriptY37D8A.23c.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScY37D8A.23c.1:c.923G>A
HGVSpCE32012:p.Trp308Ter
cDNA_position923
CDS_position923
Protein_position308
Exon_number4/6
Codon_changetGg/tAg
Amino_acid_changeW/*
Y37D8A.23b.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScY37D8A.23b.1:c.1148G>A
HGVSpCE31832:p.Trp383Ter
cDNA_position1148
CDS_position1148
Protein_position383
Exon_number6/9
Codon_changetGg/tAg
Amino_acid_changeW/*
Y37D8A.23a.1VEP_consequencestop_gained
VEP_impactHIGH
HGVScY37D8A.23a.1:c.1148G>A
HGVSpCE20226:p.Trp383Ter
cDNA_position1158
CDS_position1148
Protein_position383
Exon_number7/10
Codon_changetGg/tAg
Amino_acid_changeW/*
InteractorWBInteraction000001428
WBInteraction000517365
WBInteraction000517573
WBInteraction000555296
WBInteraction000558065
WBInteraction000558066
GeneticsInterpolated_map_positionIII20.6631
Mapping_dataIn_2_point57
68
78
6019
6109
7009
7010
In_multi_point (32)
In_pos_neg_data354
DescriptionPhenotype (22)
Phenotype_not_observedWBPhenotype:0001426Paper_evidenceWBPaper00004883
Curator_confirmedWBPerson712
Phenotype_assayGenotypearIs37Paper_evidenceWBPaper00004883
Curator_confirmedWBPerson712
WBPhenotype:0001645Paper_evidenceWBPaper00040284
Curator_confirmedWBPerson2987
RemarkTable S2Paper_evidenceWBPaper00040284
Curator_confirmedWBPerson2987
Disease_infoModels_diseaseDOID:1826
Models_disease_in_annotationWBDOannot00000549
Reference (22)
MethodSubstitution_allele