WormBase Tree Display for Variation: WBVar00142975

WBVar00142975 Evidence: Paper_evidence: WBPaper00003757
  Name: Public_name: e120
    Other_name: F26C11.2.1:c.597+1G>A
    HGVSg: CHROMOSOME_II:g.9898071C>T
  Sequence_details: SMap: S_parent: Sequence: F26C11
    Flanking_sequences: cgaccaaatgcgaaatatcccagggttcag taatttgtttcgtatagtttttcgacaaatt
    Mapping_target: F26C11
    Type_of_mutation: Substitution: g a
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain (254)
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00006744
    Transcript: F26C11.2.1 VEP_consequence: splice_donor_variant
        VEP_impact: HIGH
        HGVSc: F26C11.2.1:c.597+1G>A
        Intron_number: 6/7
    Interactor (16)
  Genetics: Interpolated_map_position: II 1.76951
    Mapping_data: In_2_point (49)
      In_multi_point (159)
      In_pos_neg_data (22)
    Marked_rearrangement: mIn1[unc-4(e120) dpy-10(e128)]
      mIn1[unc-4(e120)]
  Description: Phenotype (24)
    Phenotype_not_observed: WBPhenotype:0000641 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: Healthy, active. Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
      WBPhenotype:0001426 Paper_evidence: WBPaper00004883
        Curator_confirmed: WBPerson712
        Phenotype_assay: Genotype: arIs37 Paper_evidence: WBPaper00004883
              Curator_confirmed: WBPerson712
      WBPhenotype:0001645 Paper_evidence: WBPaper00040284
        Curator_confirmed: WBPerson2987
        Remark: Table S2 Paper_evidence: WBPaper00040284
            Curator_confirmed: WBPerson2987
  Reference (54)
  Remark: Manually curated Gene associations preserved as a text remark so that VEP is the canonical predictor of consequence: WBGene00006744 Donor
    Variation stub/paper connection generated from the May 2021 NN VFP dataset.
    Created by WBPerson51134 from the NN_VFP_triage_pipeline
  Method: Substitution_allele