WormBase Tree Display for Variation: WBVar00142909

WBVar00142909 Evidence: Paper_evidence: WBPaper00005927
      WBPaper00006395
  Name: Public_name: e14
    Other_name: CE30956:p.Trp5Ter
      F16F9.2.1:c.15G>A
    HGVSg: CHROMOSOME_X:g.8455626C>T
  Sequence_details: SMap: S_parent: Sequence: F16F9
    Flanking_sequences: agctgttttatttcagatgaggtatgcgtg gtggtctcgtttgcatttttaatacttgga
    Mapping_target: F16F9
    Type_of_mutation: Substitution: g a Paper_evidence: WBPaper00006395
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain (19)
    Laboratory: CB
    Status: Live
  Affects: Gene: WBGene00001068
    Transcript: F16F9.2.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: F16F9.2.1:c.15G>A
        HGVSp: CE30956:p.Trp5Ter
        cDNA_position: 15
        CDS_position: 15
        Protein_position: 5
        Exon_number: 1/9
        Codon_change: tgG/tgA
        Amino_acid_change: W/*
  Genetics: Interpolated_map_position: X 0.00141893
    Mapping_data: In_2_point (27)
      In_multi_point (67)
      In_pos_neg_data (19)
  Description: Phenotype: WBPhenotype:0000229 Paper_evidence: WBPaper00005927
        Curator_confirmed: WBPerson48
      WBPhenotype:0000583 Paper_evidence: WBPaper00005927
          WBPaper00000031
        Person_evidence: WBPerson261
        Curator_confirmed: WBPerson48
          WBPerson712
        Remark: small dumpy, non-roller. ES3 ME0 Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
        Ease_of_scoring: ES3_Easy_to_score: Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
    Phenotype_not_observed: WBPhenotype:0000505 Paper_evidence: WBPaper00001328
        Curator_confirmed: WBPerson712
        Remark: Males are not Ram. Paper_evidence: WBPaper00001328
            Curator_confirmed: WBPerson712
        EQ_annotations: Anatomy_term: WBbt:0006941 PATO:0000460 Paper_evidence: WBPaper00001328
                Curator_confirmed: WBPerson712
          Life_stage: WBls:0000056 PATO:0000460 Paper_evidence: WBPaper00001328
                Curator_confirmed: WBPerson712
        Phenotype_assay: Temperature: 20C Paper_evidence: WBPaper00001328
              Curator_confirmed: WBPerson712
          Genotype: him-5(e1490) Paper_evidence: WBPaper00001328
              Curator_confirmed: WBPerson712
      WBPhenotype:0000645 Person_evidence: WBPerson261
        Curator_confirmed: WBPerson712
        Remark: non-roller Person_evidence: WBPerson261
            Curator_confirmed: WBPerson712
      WBPhenotype:0000718 Paper_evidence: WBPaper00001011
        Curator_confirmed: WBPerson712
        Remark: Animals have 85%(n=20) mutant seam cell nuclei, similar to XX lin-14 animals (77% n=40). Paper_evidence: WBPaper00001011
            Curator_confirmed: WBPerson712
        Phenotype_assay: Treatment: Animals were raised at 24C. Paper_evidence: WBPaper00001011
              Curator_confirmed: WBPerson712
          Temperature: 24 Paper_evidence: WBPaper00001011
              Curator_confirmed: WBPerson712
          Genotype: lin-14(n179) Paper_evidence: WBPaper00001011
              Curator_confirmed: WBPerson712
  Reference (11)
  Method: Substitution_allele