WormBase Tree Display for Gene: WBGene00195123
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| WBGene00195123 | SMap | S_parent | Sequence | PPA_ChrV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 7 | |||||||
| Name | CGC_name | Ppa-unc-37.2 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA01382 | ||||||||
| Molecular_name | PPA01382 | ||||||||
| PPA01382.1 | |||||||||
| PP58648 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000057821 | ||||||||
| UMM-S60-31.17 | Person_evidence | WBPerson606 | |||||||
| Ppa-unc-37 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-unc-37.2 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 10 May 2010 15:35:39 | WBPerson2970 | Event | Created | |||
| 2 | 27 May 2010 16:39:21 | WBPerson1983 | Event | Acquires_merge | WBGene00090936 | ||||
| Name_change | Sequence_name | PPA01382 | |||||||
| 3 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Ppa-unc-37.2 | ||||
| Other_name | Ppa-unc-37 | ||||||||
| 4 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 5 | 08 May 2019 10:09:27 | WBPerson1983 | Name_change | CGC_name | Ppa-unc-37.2 | ||||
| 6 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 7 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-unc-37.2 | ||||
| Acquires_merge | WBGene00090936 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | unc | ||||||||
| Allele | WBVar00600761 | ||||||||
| WBVar00600760 | |||||||||
| WBVar00600759 | |||||||||
| WBVar00600758 | |||||||||
| WBVar00600757 | |||||||||
| WBVar00600756 | |||||||||
| WBVar00600755 | |||||||||
| WBVar00600754 | |||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
| GO_annotation | 00230985 | ||||||||
| 00230986 | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00275689 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | Ppa-unc-37/groucho encodes a transducin-like WD-repeat protein homologous to Drosophila GROUCHO; Ppa-groucho plays a prominent role in vulva induction, regulates the programmed cell death of P(3,4).p and limits the size of the vulva equivalence group; Ppa-groucho mutants are multivulva with P(3-7).p having vulval fates in a gonad-independent manner; Ppa-GROUCHO interacts and forms a dimer with Ppa-HAIRY, a basic Helix-Loop-Helix transcription factor that is missing in C. elegans; Ppa-GROUCHO and Ppa-HAIRY co-regulate P(3,4).p cell death. | Paper_evidence | WBPaper00027764 | |||||
| Person_evidence | WBPerson606 | ||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 08 Jul 2010 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is an ortholog of C. elegans unc-37. In C. elegans, unc-37 is involved in chemical synaptic transmission; regulation of axonogenesis; and regulation of synapse structure or activity. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA01382 | |||||||
| Corresponding_transcript | PPA01382.1 | ||||||||
| Other_sequence (25) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_81402 | |||||||
| GPL14372_Probes_81403 | |||||||||
| Interaction | WBInteraction000501082 | ||||||||
| WBInteraction000501083 | |||||||||
| Reference | WBPaper00025296 | ||||||||
| WBPaper00027429 | |||||||||
| WBPaper00027764 | |||||||||
| WBPaper00031445 | |||||||||
| WBPaper00034955 | |||||||||
| WBPaper00036209 | |||||||||
| WBPaper00036210 | |||||||||
| Remark | [190208 pad] The CGC name Ppa-unc-37.2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-unc-37.2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
