WormBase Tree Display for Gene: WBGene00192028

WBGene00192028 SMap: S_parent: Sequence: Cbre_Contig104
  Identity: Version: 2
    Name: CGC_name: Cbn-unc-75 From_analysis: Inferred_from_orthology
      Sequence_name: CBN30063
      Molecular_name: CBN30063
        CBN30063.1
        CN33959
      Public_name: Cbn-unc-75
    Species: Caenorhabditis brenneri
    History: Version_change: 1 20 May 2009 11:55:53 WBPerson1847 Event: Created
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-unc-75
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    RNASeq_FPKM: WBls:0000002 0.249088 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
        0.310984 From_analysis: RNASeq.brenneri.WBls:0000002.control_mean
        0.697173 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
        1.03937 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
        1.12421 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
            RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
            RNASeq.brenneri.WBls:0000002.control_median
      WBls:0000004 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        3.79582 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
        7.59164 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        22.8146 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        25.2656 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        32.997 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        34.023 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        39.0824 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 2.07784 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        2.28337 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        2.4889 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (14)
      WBls:0000101 1.01582 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        1.80496 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    GO_annotation: 00227802
      00227803
    Ortholog (25)
    Paralog: WBGene00141511 Caenorhabditis brenneri From_analysis: TreeFam
            GeneACeDB-Compara
      WBGene00141148 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00148207 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00149530 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00159348 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable RNA binding activity. Is an ortholog of C. elegans unc-75. In C. elegans, unc-75 is involved in several processes, including cholinergic synaptic transmission; positive regulation of synaptic transmission; and regulation of alternative mRNA splicing, via spliceosome. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN30063
    Corresponding_transcript: CBN30063.1
    Other_sequence: JI165163.1
      Hbac_isotig00300
      Hbac_isotig00301
      Dviv_isotig34647
      JI167496.1
      FK800825.1
      HG10311
      HGC00100_1
      FG582939.1
      BMC05928_1
  Experimental_info: Microarray_results: GPL14142_CBN30063_14-73_0.863_46_C
      GPL14142_CBN30063_187-246_0.890_27_B
      GPL14142_CBN30063_339-398_0.837_63_A
  Method: Gene