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WormBase Tree Display for Gene: WBGene00135423

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Name Class

WBGene00135423SMapS_parentSequenceCjap.Contig5182
IdentityVersion2
NameCGC_nameCjp-unc-130From_analysisInferred_from_orthology
Sequence_nameCJA16219
Molecular_nameCJA16219
CJA16219.1
JA40762
Public_nameCjp-unc-130
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:23WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-unc-130
229 Jul 2011 11:13:38WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000426.9641From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:000002710.0228From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:00000385.37929From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
6.09004From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
6.8008From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:00000411.4103From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
1.42966From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
2.25261From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
2.30161From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
2.36748From_analysisRNASeq.japonica.WBls:0000041.control_mean
2.54292From_analysisRNASeq.japonica.WBls:0000041.control_median
2.78422From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
2.90454From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
2.92443From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
2.93247From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
WBls:00001012.90454From_analysisRNASeq.japonica.total_over_all_stages.control_median
5.23899From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00199559
00199560
00199561
Ortholog (37)
ParalogWBGene00128005Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00129535Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00134152Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00137835Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00137633Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00124100Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00125678Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00132586Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00138617Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00210959Caenorhabditis japonicaFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity and sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans unc-130. In C. elegans, unc-130 is involved in several processes, including axon extension involved in axon guidance; negative regulation of transcription by RNA polymerase II; and nematode male tail tip morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA16219
Corresponding_transcriptCJA16219.1
Other_sequenceDviv_isotig17565
CR11553
Dviv_isotig17564
TSC04884_1
CBC08749_1
CRC07576_1
CR11552
JI182349.1
TS05801
Experimental_infoExpr_patternExpr1083974
Microarray_resultsGPL14145_CJA16219_370-429_0.888_29_C
GPL14145_CJA16219_507-566_0.926_14_B
GPL14145_CJA16219_937-996_0.948_5_A
MethodGene