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WormBase Tree Display for Gene: WBGene00058196

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Name Class

WBGene00058196SMapS_parentSequenceCrem_Contig15
IdentityVersion3
NameCGC_nameCre-unc-2From_analysisInferred_from_orthology
Sequence_nameCRE07353
Molecular_nameCRE07353
CRE07353.1
RP29037
Other_namecr01.sctg11.wum.48
Public_nameCre-unc-2
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:48WBPerson2970Name_changeCGC_nameCre-unc-2
303 Jul 2008 11:45:16WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE07353
Other_namecr01.sctg11.wum.48
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000040.813141From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
0.975401From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
1.13766From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
WBls:0000024 (53)
WBls:000002713.3531From_analysisRNASeq.remanei.WBls:0000027.control_mean
15.9309From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
16.1358From_analysisRNASeq.remanei.WBls:0000027.control_median
16.3407From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
16.4862From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
4.65466From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:00000382.81312From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
3.64126From_analysisRNASeq.remanei.WBls:0000038.control_mean
3.75713From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
4.35354From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
WBls:00000410.577029From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
0.665694From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
0.81281From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
1.11413From_analysisRNASeq.remanei.WBls:0000041.control_mean
1.14425From_analysisRNASeq.remanei.WBls:0000041.control_median
1.47569From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
1.5576From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
1.59597From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
WBls:0000063 (12)
WBls:00001011.51441From_analysisRNASeq.remanei.total_over_all_stages.control_median
3.30984From_analysisRNASeq.remanei.total_over_all_stages.control_mean
GO_annotation00153630
00153631
00153632
00153633
00153634
00153635
00153636
Ortholog (22)
ParalogWBGene00068721Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
GeneACeDB-Compara
WBGene00051243Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00061652Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00066082Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00073165Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00074138Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00074869Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00079084Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00080174Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
WBGene00084742Caenorhabditis remaneiFrom_analysisWormBase-Compara
GeneACeDB-Compara
Structured_descriptionAutomated_descriptionPredicted to enable voltage-gated calcium channel activity. Predicted to be involved in calcium ion transmembrane transport. Predicted to be located in membrane. Predicted to be part of voltage-gated calcium channel complex. Is an ortholog of C. elegans unc-2. In C. elegans, unc-2 is involved in several processes, including determination of left/right asymmetry in nervous system; negative regulation of transforming growth factor beta receptor signaling pathway; and response to heat.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE07353
Corresponding_transcriptCRE07353.1
Other_sequence (23)
Experimental_infoExpr_patternExpr1105083
Microarray_resultsGPL14146_CRE07353_4400-4459_0.740_347_B
GPL14146_CRE07353_4587-4646_0.733_375_C
GPL14146_CRE07353_4669-4728_0.805_122_A
MethodGene