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WormBase Tree Display for Gene: WBGene00025929

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Name Class

WBGene00025929SMapS_parentSequencecb25.fpc0058
IdentityVersion2
NameCGC_nameCbr-unc-53From_analysisInferred_from_orthology
Sequence_nameCBG02975
Molecular_name (15)
Other_nameCBG_02975Accession_evidenceNDBHE601438
Public_nameCbr-unc-53
DB_infoDatabaseNDBlocus_tagCBG_02975
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:04WBPerson2970Name_changeCGC_nameCbr-unc-53
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
AlleleWBVar00107947
WBVar00107948
WBVar00107943
WBVar00107949
WBVar00107944
WBVar00107950
WBVar00107945
WBVar00107951
WBVar00107946
RNASeq_FPKMWBls:000000210.6959From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
12.4644From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
13.5753From_analysisRNASeq.briggsae.WBls:0000002.control_mean
17.5655From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
11.5801From_analysisRNASeq.briggsae.WBls:0000002.control_median
12.5055From_analysisRNASeq.briggsae.WBls:0000002.control_mean
9.29617From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
WBls:00000030.780979From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
2.35066From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
3.92033From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
3.1884From_analysisRNASeq.briggsae.WBls:0000003.control_mean
4.8639From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000437.903From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
RNASeq.briggsae.WBls:0000004.control_median
38.9204From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
39.9378From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
37.374From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
37.8475From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
38.7076From_analysisRNASeq.briggsae.WBls:0000004.control_mean
40.4756From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:000002710.6718From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
18.7758From_analysisRNASeq.briggsae.WBls:0000027.control_mean
40.4663From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
5.18939From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
17.7365From_analysisRNASeq.briggsae.WBls:0000027.control_median
20.2822From_analysisRNASeq.briggsae.WBls:0000027.control_mean
24.8012From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
WBls:000003519.5657From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:000003811.7253From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
11.9466From_analysisRNASeq.briggsae.WBls:0000038.control_mean
23.5983From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
4.32403From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
8.13875From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
9.93202From_analysisRNASeq.briggsae.WBls:0000038.control_median
WBls:000004118.4951From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
2.88326From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
3.53141From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
3.8558From_analysisRNASeq.briggsae.WBls:0000041.control_median
4.18019From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
7.27249From_analysisRNASeq.briggsae.WBls:0000041.control_mean
10.223From_analysisRNASeq.briggsae.WBls:0000041.control_median
10.8268From_analysisRNASeq.briggsae.WBls:0000041.control_mean
16.2658From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
19.6049From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000633.27332From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
3.41078From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
4.30515From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
4.30658From_analysisRNASeq.briggsae.WBls:0000063.control_mean
4.88769From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
5.65598From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
3.49389From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
3.89952From_analysisRNASeq.briggsae.WBls:0000063.control_median
4.17113From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:000010110.6718From_analysisRNASeq.briggsae.total_over_all_stages.control_median
13.2819From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
11.2106From_analysisRNASeq.briggsae.total_over_all_stages.control_median
15.2421From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00129350
Ortholog (31)
Structured_descriptionAutomated_descriptionPredicted to be involved in neurogenesis. Is an ortholog of C. elegans unc-53. In C. elegans, unc-53 is involved in several processes, including backward locomotion; positive regulation of locomotion; and reproductive behavior.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG02975a
CBG02975b
CBG02975c
CBG02975d
CBG02975e
Corresponding_CDS_historyCBG02975:bp194
CBG02975:bp209
CBG02975a:bp255
CBG02975b:bp255
CBG02975c:bp255
CBG02975d:bp255
Corresponding_transcriptCBG02975a.1
CBG02975b.1
CBG02975c.1
CBG02975d.1
CBG02975e.1
Other_sequence (27)
Experimental_infoExpr_patternExpr1055055
Microarray_resultsGPL8303_CB6_WBGene00025929_A
GPL8303_CB6_WBGene00025929_B
GPL14143_CBG02975_4973-5032_0.790_43_C
GPL14143_CBG02975_5062-5121_0.799_18_B
GPL14143_CBG02975_5245-5304_0.761_151_A
MethodGene