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WormBase Tree Display for Gene: WBGene00025895

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Name Class

WBGene00025895SMapS_parentSequencecb25.fpc0058
IdentityVersion2
NameCGC_nameCbr-unc-130From_analysisInferred_from_orthology
Sequence_nameCBG02936
Molecular_nameCBG02936
CBG02936.1
CBP06384
Other_nameCBG_02936Accession_evidenceNDBHE601438
Public_nameCbr-unc-130
DB_infoDatabaseNDBlocus_tagCBG_02936
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:51:55WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-unc-130
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:00000022.22408From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
2.35223From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
2.37212From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.54006From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
0.836073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
1.98811From_analysisRNASeq.briggsae.WBls:0000002.control_mean
2.28816From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:000000311.8379From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
17.9458From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
5.73001From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
10.7542From_analysisRNASeq.briggsae.WBls:0000003.control_mean
8.58673From_analysisRNASeq.briggsae.WBls:0000003.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:000000428.5342From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
29.6397From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
30.7453From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
RNASeq.briggsae.WBls:0000004.control_median
25.8649From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
31.373From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
31.5317From_analysisRNASeq.briggsae.WBls:0000004.control_mean
41.141From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
WBls:0000024 (12)
WBls:00000270.788356From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
1.05252From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
3.77917From_analysisRNASeq.briggsae.WBls:0000027.control_mean
9.49664From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
2.38663From_analysisRNASeq.briggsae.WBls:0000027.control_median
3.72073From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
3.76456From_analysisRNASeq.briggsae.WBls:0000027.control_mean
WBls:00000352.77402From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:00000380.539164From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
0.679071From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
1.19383From_analysisRNASeq.briggsae.WBls:0000038.control_median
1.52848From_analysisRNASeq.briggsae.WBls:0000038.control_mean
1.70859From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
3.1871From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:00000410.56002From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
0.68862From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
0.72819From_analysisRNASeq.briggsae.WBls:0000041.control_median
0.767759From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
1.13344From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.51735From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
1.46834From_analysisRNASeq.briggsae.WBls:0000041.control_median
1.50176From_analysisRNASeq.briggsae.WBls:0000041.control_mean
2.16893From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
2.30786From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
WBls:00000630.240458From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
0.723682From_analysisRNASeq.briggsae.WBls:0000063.control_mean
0.791493From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
1.03008From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
1.55638From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
0.460909From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
0.626201From_analysisRNASeq.briggsae.WBls:0000063.control_median
0.679887From_analysisRNASeq.briggsae.WBls:0000063.control_mean
WBls:00001012.22408From_analysisRNASeq.briggsae.total_over_all_stages.control_median
4.94936From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
2.33004From_analysisRNASeq.briggsae.total_over_all_stages.control_median
6.84188From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
GO_annotation00129312
00129313
00129314
Ortholog (32)
Paralog (11)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity and sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans unc-130. In C. elegans, unc-130 is involved in several processes, including axon extension involved in axon guidance; negative regulation of transcription by RNA polymerase II; and nematode male tail tip morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG02936
Corresponding_CDS_historyCBG02936:bp194
Corresponding_transcriptCBG02936.1
Other_sequenceTSC01596_1
Dviv_isotig17565
CR11553
Dviv_isotig17564
CBC08749_1
CRC07576_1
TS02663
CR11552
JI182349.1
Experimental_infoExpr_patternExpr1053457
Microarray_resultsGPL8303_CB6_WBGene00025895_A
GPL8303_CB6_WBGene00025895_B
GPL8303_CB6_WBGene00025895_C
GPL8303_CB6_WBGene00025895_D
GPL8303_CB6_WBGene00025895_E
GPL14143_CBG02936_386-445_0.826_21_C
GPL14143_CBG02936_487-546_0.834_11_B
GPL14143_CBG02936_872-931_0.848_4_A
MethodGene