WormBase Tree Display for Gene: WBGene00021519
expand all nodes | collapse all nodes | view schema
| WBGene00021519 | SMap | S_parent | Sequence | Y41D4B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y41D4B.17 | |||||||
| Molecular_name | Y41D4B.17 | ||||||||
| Y41D4B.17.1 | |||||||||
| CE21858 | |||||||||
| Other_name | CELE_Y41D4B.17 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y41D4B.17 | ||||||||
| DB_info | Database | AceView | gene | 4C325 | |||||
| WormQTL | gene | WBGene00021519 | |||||||
| WormFlux | gene | WBGene00021519 | |||||||
| NDB | locus_tag | CELE_Y41D4B.17 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021519|UniProtKB=Q95Y18 | |||||||
| family | PTHR21733 | ||||||||
| NCBI | gene | 176964 | |||||||
| RefSeq | protein | NM_067698.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315857 | |||||||
| TrEMBL | UniProtAcc | Q95Y18 | |||||||
| UniProt_GCRP | UniProtAcc | Q95Y18 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (66) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP4641 | ||||||||
| Ortholog | WBGene00078935 | Caenorhabditis remanei | From_analysis | OMA | |||||
| TreeFam | |||||||||
| Inparanoid_8 | |||||||||
| WormBase-Compara | |||||||||
| CBOVI.g10790 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
| CSP29.g21746 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
| CSP31.g9564 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
| CSP38.g15562 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
| CSP38.g15563 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
| CSP39.g4397 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
| chrIV_pilon.g9698 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (21) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalppappa; ABarappppa; intestine; male distal tip cell; and mechanosensory neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by eighteen chemicals including methylmercuric chloride; mianserin; and D-glucopyranose based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Transmembrane glycoprotein. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y41D4B.17 | |||||||
| Corresponding_transcript | Y41D4B.17.1 | ||||||||
| Associated_feature | WBsf645800 | ||||||||
| WBsf227954 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056386 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000846 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020493 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056385 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028084 | ||||||||
| Expr1039408 | |||||||||
| Expr1159871 | |||||||||
| Expr2007444 | |||||||||
| Expr2025680 | |||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (214) | |||||||||
| Map_info | Positive | Positive_clone | Y41D4B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -17.8085 | |||||||
| Method | Gene |
