WormBase Tree Display for Gene: WBGene00020883
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| WBGene00020883 | SMap | S_parent | Sequence | T28A11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-64 | Person_evidence | WBPerson655 | |||||
| Sequence_name | T28A11.21 | ||||||||
| Molecular_name | T28A11.21 | ||||||||
| T28A11.21.1 | |||||||||
| CE32215 | |||||||||
| Other_name | CELE_T28A11.21 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | fbxa-64 | ||||||||
| DB_info | Database | AceView | gene | 5D750 | |||||
| WormQTL | gene | WBGene00020883 | |||||||
| WormFlux | gene | WBGene00020883 | |||||||
| NDB | locus_tag | CELE_T28A11.21 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020883|UniProtKB=P91522 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 189026 | |||||||
| RefSeq | protein | NM_071504.4 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | P91522 | |||||||
| UniProt_GCRP | UniProtAcc | P91522 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-64 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (45) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (22) | |||||||||
| Paralog (225) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Expressed in body wall musculature; ventral nerve cord; and vulval muscle. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T28A11.21 | |||||||
| Corresponding_CDS_history | T28A11.21:wp88 | ||||||||
| Corresponding_transcript | T28A11.21.1 | ||||||||
| Associated_feature | WBsf233474 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00040761 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00054363 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019365 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4929 | ||||||||
| Expr1039098 | |||||||||
| Expr1157909 | |||||||||
| Expr2011565 | |||||||||
| Expr2029803 | |||||||||
| Drives_construct | WBCnstr00012342 | ||||||||
| WBCnstr00024813 | |||||||||
| Construct_product | WBCnstr00024813 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (105) | |||||||||
| Interaction (25) | |||||||||
| Map_info | Map | V | Position | -12.3707 | Error | 0.010568 | |||
| Positive | Positive_clone | T28A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00012854 | ||||||||
| WBPaper00031003 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
