WormBase Tree Display for Gene: WBGene00020141
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| WBGene00020141 | SMap | S_parent | Sequence | T01C4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | lmd-5 | Person_evidence | WBPerson8574 | |||||
| Sequence_name | T01C4.1 | ||||||||
| Molecular_name | T01C4.1 | ||||||||
| T01C4.1.1 | |||||||||
| CE51458 | |||||||||
| Other_name | CELE_T01C4.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | lmd-5 | ||||||||
| DB_info | Database | AceView | gene | 5H605 | |||||
| WormQTL | gene | WBGene00020141 | |||||||
| WormFlux | gene | WBGene00020141 | |||||||
| NDB | locus_tag | CELE_T01C4.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020141|UniProtKB=Q94298 | |||||||
| family | PTHR46073 | ||||||||
| NCBI | gene | 187942 | |||||||
| RefSeq | protein | NM_001322564.2 | |||||||
| TrEMBL | UniProtAcc | Q94298 | |||||||
| UniProt_GCRP | UniProtAcc | Q94298 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 25 Jan 2013 14:30:54 | WBPerson2970 | Name_change | CGC_name | lmd-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lmd | ||||||||
| Allele (80) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00087597 | ||||||||
| 00087598 | |||||||||
| 00087599 | |||||||||
| 00087600 | |||||||||
| 00124848 | |||||||||
| 00124849 | |||||||||
| Ortholog (41) | |||||||||
| Paralog (38) | |||||||||
| Structured_description | Automated_description | Predicted to enable chitin binding activity and hydrolase activity, acting on glycosyl bonds. Predicted to be involved in carbohydrate metabolic process and rejection of self pollen. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T01C4.1 | |||||||
| Corresponding_CDS_history | T01C4.1:wp252 | ||||||||
| Corresponding_transcript | T01C4.1.1 | ||||||||
| Associated_feature | WBsf1000436 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00052102 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017952 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103499 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017957 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028800 | ||||||||
| Expr1155734 | |||||||||
| Expr2013233 | |||||||||
| Expr2031464 | |||||||||
| Drives_construct | WBCnstr00025348 | ||||||||
| Construct_product | WBCnstr00025348 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (81) | |||||||||
| Interaction | WBInteraction000170445 | ||||||||
| WBInteraction000286748 | |||||||||
| Map_info | Map | V | Position | 0.599267 | |||||
| Positive | Positive_clone | T01C4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00048648 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
